Mechanism for the biosynthesis of GPP, FPP, GGPP and corresponding terpene compounds [1].

<p>Mechanism for the biosynthesis of GPP, FPP, GGPP and corresponding terpene compounds [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0146983#pone.0146983.ref001" target="_blank">1</a>].</p

The most abundant terpene compounds from each cluster and TPS.

<p>The most abundant terpene compounds from each cluster and TPS.</p

Phylogenetic tree analysis of Endophyte Terpene Synthases.

<p>A) Comparison of TPSs from four endophytic fungi in the genus Hypoxylon or Daldinia. A total of 26 TPSs from these fungi were grouped into five distinct clusters., B) Comparison of endophyte and plant TPSs., C) Comparison of endophyte and other fungal TPSs.</p

Phylogenetic bins and statistics.

a<p>: Based on blastn coverage of reference genome, rather than phylogenetic markers. ^b: Including additional cluster at 12.0 read coverage that likely corresponds to a Sphaerobacter megaplasmid. ^c: See also <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0068465#pone.0068465.s003" target="_blank">File S3</a>.</p

Normalized protein abundance within each of the three proteome fractions, by phylogenetic bins.

<p>Normalized protein abundance within each of the three proteome fractions, by phylogenetic bins.</p

Carbohydrate active enzymes and ligninases in metagenome (see also File S4).

<p>Carbohydrate active enzymes and ligninases in metagenome (see also <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0068465#pone.0068465.s004" target="_blank">File S4</a>).</p

Top 10 most abundant overrepresented proteins in the supernatant (see also File S5).

a<p>: Not binned; assigned based on best blastp hit.</p

A5IL97 production in <i>A</i>. <i>niger</i>.

<p>A5IL97 production in <i>A</i>. <i>niger</i>.</p

Overrepresented lignocellulolytic enzymes in the supernatant (see also File S5).

a<p>: Not binned; assigned based on best blastp hit.</p

Each contig was plotted against its average read coverage per base (X axis), and its GC% content (Y axis).

<p>The surface area of each circle is proportional to the length of the contigs in bp, giving an intuitive visualization of how much metagenomic sequence is covered by each cluster. Phylogenetic bins are represented by different colors, while grey circles represent (typically smaller) contigs that were not assigned to a bin.</p