Latitudinal and taxonomic patterns in the feeding ecologies of fish larvae : a literature synthesis

Author Posting. © The Author(s), 2012. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Journal of Marine Systems 109/110 (2013): 69-77, doi:10.1016/j.jmarsys.2012.05.002.The longtime focus on factors that influence the survival of marine fish larvae has yielded an extensive number of studies on larval fish diets and feeding success. In light of a recent increase in such studies within lower latitudes, results from the peer-reviewed literature were synthesized to examine both latitudinal and taxonomic differences in several trophic-related categories, including feeding incidence, trophic niche breadth, ontogenetic diet shifts, dominant prey types, diet broadness, and larval piscivory. A total of 204 investigations (taxon-article combinations) contained suitable results for at least one of these categories. Feeding incidences (proportions of larvae containing food) were significantly higher in lower latitudes with all taxa combined, as well as only within the order Perciformes. Feeding incidences also differed among orders, with Perciformes and Scorpaeniformes having the highest values. The number of larval taxa exhibiting a significantly increasing niche breadth (SD of the log of prey sizes) with larval size decreased toward lower latitudes, with some taxa in lower latitudes exhibiting a decrease in niche breadth with size. The frequency of exhibiting ontogenetic diets shifts decreased with decreasing latitude, as did relative diet broadness (a function of prey types). The most common dominant prey types in the diets of higher latitude larvae were nauplii and calanoid copepods, with cyclopoids being rare in higher latitudes. Dominant prey types in lower latitudes were more diverse, with nauplii, calanoids, and cyclopoids being equally important. Appendicularians increased in importance with decreasing latitude, and one of the clearest latitudinal distinctions was the display of larval piscivory (almost exclusively by scombroid taxa), which was highly concentrated in lower latitudes. Overall, the latitudinal differences observed for multiple trophic related factors highlight inherent distinctions in larval fish feeding ecologies, likely reflecting differences in the overall structure of planktonic food webs over large latitudinal gradients.This work was supported by the Postdoctoral Scholar Program at the Woods Hole Oceanographic Institution, with funding provided by the Cooperative Institute for the North Atlantic Region

Trophic ecology of barrelfish (Hyperoglyphe perciformis) in oceanic waters of southeast Florida

Author Posting. © The Author(s), 2017. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Bulletin of Marine Science 93 (2017): 987-996, doi:/10.5343/bms.2017.1003.Deep-water demersal fishes represent an understudied but ecologically important group of organisms. Select species of demersal fishes rely on pelagic prey items, representing a direct transport of surface carbon to greater depths. Barrelfish Hyperoglyphe perciformis (Mitchell, 1818), which inhabit deep slope waters, are a species that has been suggested to fill this role, as congeners consume primarily pelagic gelatinous zooplankton; however, there is a dearth of information on the trophic ecology of barrelfish. Stomach content and stable isotope analyses were conducted on barrelfish caught by recreational fishers off Miami, Florida to improve our understanding of the feeding of this species. Pyrosoma atlanticum (Péron, 1804), a pelagic, vertically migrating tunicate, represented 89% of the barrelfish diet by weight. Mesopelagic fish and shrimp contributed much smaller proportions. Standard ellipse areas corrected for sample size (SEAc) showed a substantially smaller isotopic niche width for barrelfish (0.606 ‰2) than dolphinfish (2.16 ‰2), king mackerel (3.04 ‰2), or wahoo (1.97 ‰2). Coupled with dependence on a singular prey item, the low SEAc of barrelfish suggests they occupy a limited trophic niche space. Overlap of barrelfish SEAc with dolphinfish (99.5% overlap) and king mackerel (100% overlap) indicate that the carbon sources as well as the number of trophic steps for barrelfish are similar to king mackerel and dolphinfish and are linked to surface waters. This trophic linkage suggests that barrelfish may play a role in carbon export and further study into their behavior and daily consumption rates is warranted for quantifying this role.Funding was provided to JJS from a Small Undergraduate Research Grant Experience (SURGE). JKL was supported as a Cooperative Institute for the North Atlantic Region fellow with funds from NOAA

Movements and spawning of white marlin (Tetrapturus albidus) and blue marlin (Makaira nigricans) off Punta Cana, Dominican Republic

With a focus on white marlin (Tetrapturus albidus), a concurrent electronic tagging and larval sampling effort was conducted in the vicinity of Mona Passage (off southeast Hispaniola), Dominican Republic, during April and May 2003. Objectives were 1) to characterize the horizontal and vertical movement of adults captured from the area by using pop-up satellite archival tags (PSATs); and 2) by means of larval sampling, to investigate whether fish were reproducing. Trolling from a sportfishing vessel yielded eight adult white marlin and one blue marlin (Makaira nigricans); PSAT tags were deployed on all but one of these individuals. The exception was a female white marlin that was unsuitable for tagging because of injury; the reproductive state of its ovaries was examined histologically. Seven of the PSATs reported data summaries for water depth, temperature, and light levels measured every minute for periods ranging from 28 to 40 days. Displacement of marlin from the location of release to the point of tag pop-up ranged from 3l.6 to 267.7 nautical miles (nmi) and a mean displacement was 3.4 nmi per day for white marlin. White and blue marlin mean daily displacements appeared constrained compared to the results of other marlin PSAT tagging studies. White marlin ovarian sections contained postovulatory follicles and final maturation-stage oocytes, which indicated recent and imminent spawning. Neuston tows (n=23) yielded 18 istiophorid larvae: eight were white marlin, four were blue marlin, and six could not be identified to species. We speculate that the constrained movement patterns of adults may be linked to reproductive activity for both marlin species, and, if true, these movement patterns may have several implications for management. Protection of the potentially important white marlin spawning ground near Mona Passage seems warranted, at least until further studies can be conducted on the temporal and spatial extent of reproduction and associated adult movement

Exploring interannual variability in potential spawning habitat for Atlantic bluefin tuna in the Slope Sea

© The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Rypina, I. I., Dotzel, M. M., Pratt, L. J., Hernandez, C. M., & Llopiz, J. K. Exploring interannual variability in potential spawning habitat for Atlantic bluefin tuna in the Slope Sea. Progress in Oceanography, 192, (2021): 102514, https://doi.org/10.1016/j.pocean.2021.102514.The Slope Sea in the Northwest Atlantic Ocean, located between the Gulf Stream and the continental shelf of the Northeast United States, is a recently-documented possible major spawning ground for Atlantic bluefin tuna (Thunnus thynnus). Larval surveys and a habitat modeling study have shown that suitable spawning habitat occurs in the Slope Sea, but the degree to which this habitat varies interannually is an open question. Here, we perform a decade-long (2009–2018) numerical modeling analysis, with simulated larvae released uniformly throughout the Slope Sea, to investigate the interannual variability in the water temperature and circulation criteria deemed necessary for successful spawning. We also quantify the influence of Gulf Stream meanders and overshoot events on larval retention and their effect on habitat suitability rates throughout the Slope Sea, defined as the percentage of simulated larvae released at a given location that satisfy criteria related to water temperature and retention near nursery habitat. Average environmental oceanographic conditions over the decade are most favorable in the western part of the Slope Sea, specifically in the Slope Gyre and away from the immediate vicinity of the Gulf Stream. Variability in domain- and summertime-averaged yearly spawning habitat suitability rates is up to 25% of the mean decadal-averaged values. Yearly habitat suitability correlates strongly with the Gulf Stream overshoot but does not correlate well with other oceanographic variables or indices, so an overshoot index can be used as a sole oceanographic proxy for predicting yearly bluefin spawning habitat suitability in the Slope Sea. Selective spawning can weaken the correlation between habitat suitability and Gulf Stream overshoot. Effort should be put towards collecting observational data against which we could validate our findings.This work was funded by a US National Science Foundation (NSF) grant (OCE-1558806) awarded to IIR, LJP, and JKL. MMD was supported by an NSF Graduate Research Fellowship. CMH was partially supported by the Adelaide and Charles Link Foundation and the J. Seward Johnson Endowment in support of the Woods Hole Oceanographic Institution’s Marine Policy Center

Microbial and nutrient dynamics in mangrove, reef, and seagrass waters over tidal and diurnal time scales

© The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Becker, C. C., Weber, L., Suca, J. J., Llopiz, J. K., Mooney, T. A., & Apprill, A. Microbial and nutrient dynamics in mangrove, reef, and seagrass waters over tidal and diurnal time scales. Aquatic Microbial Ecology, 85, (2020): 101-119, https://doi.org/10.3354/ame01944.In coral reefs and adjacent seagrass meadow and mangrove environments, short temporal scales (i.e. tidal, diurnal) may have important influences on ecosystem processes and community structure, but these scales are rarely investigated. This study examines how tidal and diurnal forcings influence pelagic microorganisms and nutrient dynamics in 3 important and adjacent coastal biomes: mangroves, coral reefs, and seagrass meadows. We sampled for microbial (Bacteria and Archaea) community composition, cell abundances and environmental parameters at 9 coastal sites on St. John, US Virgin Islands that spanned 4 km in distance (4 coral reefs, 2 seagrass meadows and 3 mangrove locations within 2 larger bays). Eight samplings occurred over a 48 h period, capturing day and night microbial dynamics over 2 tidal cycles. The seagrass and reef biomes exhibited relatively consistent environmental conditions and microbial community structure but were dominated by shifts in picocyanobacterial abundances that were most likely attributed to diel dynamics. In contrast, mangrove ecosystems exhibited substantial daily shifts in environmental parameters, heterotrophic cell abundances and microbial community structure that were consistent with the tidal cycle. Differential abundance analysis of mangrove-associated microorganisms revealed enrichment of pelagic oligotrophic taxa during high tide and enrichment of putative sediment-associated microbes during low tide. Our study underpins the importance of tidal and diurnal time scales in structuring coastal microbial and nutrient dynamics, with diel and tidal cycles contributing to a highly dynamic microbial environment in mangroves, and time of day likely contributing to microbial dynamics in seagrass and reef biomes.This research was supported by NSF awards OCE-1536782 to T.A.M., J.K.L., and A.A. and OCE-1736288 to A.A., NOAA Cooperative Institutes award NA19O AR 4320074 to A.A. and E. Kujawinski and the Andrew W. Mellon Foundation Endowed Fund for Innovative Research to A.A

Soundscapes influence the settlement of the common caribbean coral porites astreoides irrespective of light conditions

Author Posting. © Royal Society, 2018. This article is posted here by permission of Royal Society for personal use, not for redistribution. The definitive version was published in Proceedings of the Royal Society Open Science 5(12) (2018): 181358. doi: 10.1098/rsos.181358.The settlement of reef-building corals is critical to the survival and recovery of reefs. Recent evidence indicates that coral larvae orient towards reef sound, yet the components of the acoustic environment that may attract coral larvae and induce settlement are unknown. Here we investigated the effects of ambient soundscapes on settlement of Porites astreoides coral larvae using in situ chambers on reefs differing in habitat quality (coral and fish abundance). Mean larval settlement was twice as high in an acoustic environment with high levels of low-frequency sounds, typical of a high-quality, healthy reef; this result was observed in both natural light and dark treatments. Overall, the enhancement of coral settlement by soundscapes typical of healthy reefs suggests a positive feedback where soundscape properties of reefs with elevated coral and fish abundance may facilitate coral recruitment.This study is funded by NSF Biological Oceanography award 15-36782 which supported all authors

Evidence and patterns of tuna spawning inside a large no-take marine protected area

© The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Hernandez, C. M., Witting, J., Willis, C., Thorrold, S. R., Llopiz, J. K., & Rotjan, R. D. Evidence and patterns of tuna spawning inside a large no-take marine protected area. Scientific Reports, 9(1), (2019): 10772, doi:10.1038/s41598-019-47161-0.The Phoenix Islands Protected Area (PIPA), one of the world’s largest marine protected areas, represents 11% of the exclusive economic zone of the Republic of Kiribati, which earns much of its GDP by selling tuna fishing licenses to foreign nations. We have determined that PIPA is a spawning area for skipjack (Katsuwonus pelamis), bigeye (Thunnus obesus), and yellowfin (Thunnus albacares) tunas. Our approach included sampling larvae on cruises in 2015–2017 and using a biological-physical model to estimate spawning locations for collected larvae. Temperature and chlorophyll conditions varied markedly due to observed ENSO states: El Niño (2015) and neutral (2016–2017). However, larval tuna distributions were similar amongst years. Generally, skipjack larvae were patchy and more abundant near PIPA’s northeast corner, while Thunnus larvae exhibited lower and more even abundances. Genetic barcoding confirmed the presence of bigeye (Thunnus obesus) and yellowfin (Thunnus albacares) tuna larvae. Model simulations indicated that most of the larvae collected inside PIPA in 2015 were spawned inside, while stronger currents in 2016 moved more larvae across PIPA’s boundaries. Larval distributions and relative spawning output simulations indicated that both focal taxa spawned inside PIPA in all 3 study years, demonstrating that PIPA is protecting viable tuna spawning habitat.Funding and support was provided by the PIPA Trust, Waitt and Oceans5 Foundations, Sea Education Association, the Prince Albert of Monaco Foundation II, New England Aquarium, and Boston University to R.R. and J.W. C.H. was additionally supported by a National Science Foundation Graduate Research Fellowship. J.L. was additionally supported by NOAA through the Cooperative Institute for the North Atlantic Region (CINAR) under Cooperative Agreement NA14OAR4320158 in the form a CINAR Fellow Award, as well as by the WHOI Academic Programs Office. We thank A. Breef-Pilz for onboard sampling assistance, as well as S. Glancy, J. Pringle, E. Martin, J. Fisher, H. Goss, J. Jaskiel, S. Sheehan, and C. Moller for lab assistance. We thank the PIPA Trust and the PIPA Implementation Office for their support, as well as on-ship Kiribati Observers for their support and assistance: Tekeua Auatabu, Iannang Teaioro, Toaea Beiateuea, Taremon Korere, Kareati Waysang, and Moamoa Kabuati. We thank Q. Hanich for reading sections of this paper in advance. This research was conducted under Kiribati and PIPA permits PRP #s 3/17, 1/16, and 2/15 to JW

Feeding dynamics of Northwest Atlantic small pelagic fishes

Author Posting. © The Author(s), 2018. This is the author's version of the work. It is posted here under a nonexclusive, irrevocable, paid-up, worldwide license granted to WHOI. It is made available for personal use, not for redistribution. The definitive version was published in Progress in Oceanography 165 (2018): 52-62, doi:10.1016/j.pocean.2018.04.014.Small pelagic fishes represent a critical link between zooplankton and large predators. Yet, the taxonomic resolution of the diets of these important fishes is often limited, especially in the Northwest Atlantic. We examined the diets, along with stable isotope signatures, of five dominant small pelagic species of the Northeast US continental shelf ecosystem (Atlantic mackerel Scomber scombrus, Atlantic herring Clupea harengus, alewife Alosa pseudoharengus, blueback herring Alosa aestivalis, and Atlantic butterfish Peprilus triacanthus). Diet analyses revealed strong seasonal differences in most species. Small pelagic fishes predominantly consumed Calanus copepods, small copepod genera (Pseudocalanus/Paracalanus/Clausocalanus), and Centropages copepods in the spring, with appendicularians also important by number for most species. Krill, primarily Meganyctiphanes norvegica, and hyperiid amphipods of the genera Hyperia and Parathemisto were common in the stomach contents of four of the five species in the fall, with hyperiids common in the stomach contents of butterfish in both seasons and krill common in the stomach contents of alewife in both seasons. Depth and region were also found to be sources of variability in the diets of Atlantic mackerel, Atlantic herring, and alewife (region but not depth) with krill being more often in the diet of alewife in more northerly locations, primarily the Gulf of Maine. Stable isotope data corroborate the seasonal differences in diet but overlap of isotopic niche space contrasts that of dietary overlap, highlighting the differences in the two methods. Overall, the seasonal variability and consumer-specific diets of small pelagic fishes are important for understanding how changes in the zooplankton community could influence higher trophic levels.Funding for this work was primarily through a US National Science Foundation (NSF) OCE-RIG grant (OCE 1325451) to JKL, with additional support from NOAA through the Cooperative Institute for the North Atlantic Region (CINAR) under Cooperative Agreement NA14OAR4320158 in the form a CINAR Fellow Award (JKL), an NSF Long-term Ecological Research grant for the Northeast US Shelf Ecosystem (OCE 1655686; JKL), a Hendrix College summer research award (ZRK), and an NSF REU-supported Woods Hole Oceanographic Institution Summer Student Fellowship (SLH)

Support for the Slope Sea as a major spawning ground for Atlantic bluefin tuna: evidence from larval abundance, growth rates, and particle-tracking simulations

© The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Hernandez, C. M., Richardson, D. E., Rypina, I. I., Chen, K., Marancik, K. E., Shulzitski, K., & Llopiz, J. K. Support for the Slope Sea as a major spawning ground for Atlantic bluefin tuna: evidence from larval abundance, growth rates, and particle-tracking simulations. Canadian Journal of Fisheries and Aquatic Sciences, 79(5), (2021): 814-824, https://doi.org/10.1139/cjfas-2020-0444.Atlantic bluefin tuna (Thunnus thynnus) are commercially and ecologically valuable, but management is complicated by their highly migratory lifestyle. Recent collections of bluefin tuna larvae in the Slope Sea off northeastern United States have opened questions about how this region contributes to population dynamics. We analyzed larvae collected in the Slope Sea and the Gulf of Mexico in 2016 to estimate larval abundance and growth rates and used a high-resolution regional ocean circulation model to estimate spawning locations and larval transport. We did not detect a regional difference in growth rates, but found that Slope Sea larvae were larger than Gulf of Mexico larvae prior to exogenous feeding. Slope Sea larvae generally backtracked to locations north of Cape Hatteras and would have been retained within the Slope Sea until the early juvenile stage. Overall, our results provide supporting evidence that the Slope Sea is a major spawning ground that is likely to be important for population dynamics. Further study of larvae and spawning adults in the region should be prioritized to support management decisions.Ship time was supported by NOAA, the Bureau of Ocean Energy Management, and the US Navy through interagency agreements for Atlantic Marine Assessment Program for Protected Species (AMAPPS). CMH and JKL received funding from the Woods Hole Oceanographic Institution’s Ocean Life Institute (#13080700) and Academic Programs Office. CMH was additionally supported by the Adelaide and Charles Link Foundation and the J. Seward Johnson Endowment in support of the Woods Hole Oceanographic Institution’s Marine Policy Center. IIR, KC, and JKL were supported by a US National Science Foundation (NSF) grant (OCE-1558806). JKL was additionally supported by the Lenfest Fund for Early Career Scientists and the Early Career Scientist Fund at Woods Hole Oceanographic Institution

Exploring the use of environmental DNA (eDNA) to detect animal taxa in the Mesopelagic Zone

© The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Govindarajan, A. F., Francolini, R. D., Jech, J. M., Lavery, A. C., Llopiz, J. K., Wiebe, P. H., & Zhang, W. Exploring the use of environmental DNA (eDNA) to detect animal taxa in the Mesopelagic Zone. Frontiers in Ecology and Evolution, 9, (2021): 574877, https://doi.org/10.3389/fevo.2021.574877.Animal biodiversity in the ocean’s vast mesopelagic zone is relatively poorly studied due to technological and logistical challenges. Environmental DNA (eDNA) analyses show great promise for efficiently characterizing biodiversity and could provide new insight into the presence of mesopelagic species, including those that are missed by traditional net sampling. Here, we explore the utility of eDNA for identifying animal taxa. We describe the results from an August 2018 cruise in Slope Water off the northeast United States. Samples for eDNA analysis were collected using Niskin bottles during five CTD casts. Sampling depths along each cast were selected based on the presence of biomass as indicated by the shipboard Simrad EK60 echosounder. Metabarcoding of the 18S V9 gene region was used to assess taxonomic diversity. eDNA metabarcoding results were compared with those from net-collected (MOCNESS) plankton samples. We found that the MOCNESS sampling recovered more animal taxa, but the number of taxa detected per liter of water sampled was significantly higher in the eDNA samples. eDNA was especially useful for detecting delicate gelatinous animals which are undersampled by nets. We also detected eDNA changes in community composition with depth, but not with sample collection time (day vs. night). We provide recommendations for applying eDNA-based methods in the mesopelagic including the need for studies enabling interpretation of eDNA signals and improvement of barcode reference databases.This research was part of the Woods Hole Oceanographic Institution’s Ocean Twilight Zone Project, funded as part of The Audacious Project housed at TED. Funding for the NOAA Ship Henry B Bigelow was provided by NOAA’s Office of Marine and Aviation Operations (OMAO)