Effects of the Non-Newtonian Rheology on the Fluid-Structure Interactions in Biological Flows

Fluid-structure interactions (FSIs) in non-Newtonian fluid flows are found in many industrial processes and biological systems, and the non-Newtonian rheology has significant effects on FSIs. However, it is a challenge to model FSIs involving non-Newtonian flows due to their complex characteristics. In this work, FSIs involving non-Newtonian flows are investigated by the immersed boundary-lattice Boltzmann method (IB-LBM). Firstly, an efficient and accurate IB-LBM solver for FSIs involving non-Newtonian fluids is developed. The governing equations for non-Newtonian fluids are solved by the lattice Boltzmann method. Several solid structures including 2D and 3D rigid and deformable particles, filaments and flags are considered, and the interaction between the fluid and solid structures is achieved by the immersed boundary method. Validation cases against previous experimental and numerical results confirm the accuracy of the present solver. Secondly, the dynamics of 2D and 3D capsules in Newtonian and viscoelastic shear flows is studied. The results show that the Reynolds number, the non-dimensional shear rate, the bending stiffness and the internal-to-external viscosity ratio may influence the behaviours of a capsule in a Newtonian shear flow. In addition, the capsules in viscoelastic shear flows are found to experience smaller deformations at lower Weissenberg numbers (Wi) and continuous increasing deformation when Wi is sufficiently high. Thirdly, the behaviours of a flexible filament in Newtonian and viscoelastic (Giesekus and FENE-CR) uniform flows are investigated. It is found that the Reynolds number promotes the flapping motion of the filament. The viscoelasticity of the Giesekus fluid facilitates the flapping motion of the filament. In contrast, the viscoelasticity of the FENE-CR fluid hinders the flapping motion. Finally, the behaviours of a capsule in a contraction-expansion microchannel are studied. The results show that the capsule tends to focus to different equilibrium trajectories in a Newtonian fluid at a lower confinement depending on the initial position. In contrast, the viscoelasticity of the fluid caused the same equilibrium trajectory which is independent of the initial position of the capsule. In addition, at higher confinement, the capsule migrates to a lower equilibrium trajectory with increasing Wi

Evaluating Interpolation and Extrapolation Performance of Neural Retrieval Models

A retrieval model should not only interpolate the training data but also extrapolate well to the queries that are different from the training data. While neural retrieval models have demonstrated impressive performance on ad-hoc search benchmarks, we still know little about how they perform in terms of interpolation and extrapolation. In this paper, we demonstrate the importance of separately evaluating the two capabilities of neural retrieval models. Firstly, we examine existing ad-hoc search benchmarks from the two perspectives. We investigate the distribution of training and test data and find a considerable overlap in query entities, query intent, and relevance labels. This finding implies that the evaluation on these test sets is biased toward interpolation and cannot accurately reflect the extrapolation capacity. Secondly, we propose a novel evaluation protocol to separately evaluate the interpolation and extrapolation performance on existing benchmark datasets. It resamples the training and test data based on query similarity and utilizes the resampled dataset for training and evaluation. Finally, we leverage the proposed evaluation protocol to comprehensively revisit a number of widely-adopted neural retrieval models. Results show models perform differently when moving from interpolation to extrapolation. For example, representation-based retrieval models perform almost as well as interaction-based retrieval models in terms of interpolation but not extrapolation. Therefore, it is necessary to separately evaluate both interpolation and extrapolation performance and the proposed resampling method serves as a simple yet effective evaluation tool for future IR studies.Comment: CIKM 2022 Full Pape

The Effect of Roughness on the Nonlinear Flow in a Single Fracture with Sudden Aperture Change

AbstractAbrupt changes in aperture (sudden expansion and contraction) are commonly seen in naturally occurred or artificial single fractures. The relevant research mainly focuses on the changes in fluid properties caused by the sudden expansion of the aperture in smooth parallel fractures. To investigate the effects of roughness on the nonlinear flow properties in a single rough fracture with abruptly aperture change (SF-AC), the flow characteristics of the fractures under different Reynolds numbers Re (50~2000) are simulated by the turbulence k-ε steady-state modulus with the Naiver-Stokes equation. The results show that, in a rough SF-AC, the growth of the eddy and the flow path deflection of the mainstream zone are more obvious than those in a smooth SF-AC, and the discrepancies between the rough and smooth SF-ACs become even more obvious when the relative roughness and/or Re values become greater. The increase of the fracture roughness leads to the generation of more local eddies on the rough SF-ACs and enhances the flow path deflection in the sudden expansion fracture. The number of eddies increases with Re, and the size of eddy area increases linearly with Re at first. When Re reaches a value of 300-500, the growth rate of the eddy size slows down and then stabilizes. Groundwater flow in a rough SF-AC follows a clearly visible nonlinear (or non-Darcy) flow law other than the linear Darcy’s law. The Forchheimer equation fits the hydraulic gradient-velocity (J-v) better than the linear Darcy’s law. The corresponding critical Re value at which the nonlinear flow starts to dominate in a rough SF-AC is around 300~500

Increased KIF15 Expression Predicts a Poor Prognosis in Patients with Lung Adenocarcinoma

Background/Aims: Lung cancer is the leading cause of cancer-related deaths worldwide. The outcome of patients with non-small cell lung cancer remains poor; the 5-year survival rate for stage IV non-small cell lung cancer is only 1.0%. KIF15 is a tetrameric kinesin spindle motor that has been investigated for its regulation of mitosis. While the roles of kinesin motor proteins in the regulation of mitosis and their potentials as therapeutic targets in pancreatic cancer have been described previously, the role of KIF15 in lung cancer development remains unknown. Methods: Paired lung carcinoma specimens and matched adjacent normal tissues were used for protein analysis. Clinical data were obtained from medical records. We first examined KIF15 messenger RNA expression in The Cancer Genome Atlas database, and then determined KIF15 protein levels using immunohistochemistry and western blotting. Differences between the groups were analyzed using repeated measures analysis of variance. Overall survival was analyzed using the Kaplan–Meier method. Cell-cycle and proliferation assays were conducted using A549, NCI-H1299, and NCI-H226 cells. Results: KIF15 was significantly upregulated at both the messenger RNA and protein levels in human lung tumor tissues. In patients with lung adenocarcinoma, KIF15 expression was positively associated with disease stages; high KIF15 expression predicted a poor prognosis. KIF15 knockdown using short hairpin RNA in two human lung adenocarcinoma cell lines induced G1/S phase cell cycle arrest and inhibited cell growth, but there was no effect in human lung squamous cell carcinoma. Conclusion: Our findings show that KIF15 is involved in lung cancer carcinogenesis. KIF15 could therefore serve as a specific prognostic marker for patients with lung adenocarcinoma

Cellular immunotherapy as maintenance therapy prolongs the survival of the patients with small cell lung cancer in extensive stage

AbstractBackgroundSmall cell lung cancer (SCLC) is the most devastating type of human lung cancer. Patients usually present with disseminated disease to many organs (extensive stage). This study was to investigate the efficacy and safety of cellular immunotherapy (CIT) with autologous natural killer (NK), γδT, and cytokine-induced killer (CIK) cells as maintenance therapy for extensive-stage SCLC (ES-SCLC) patients.MethodsA pilot prospective cohort study was conducted with ES-SCLC patients who had responded to initial chemotherapy. Patients received either CIT as maintenance therapy (CIT group), or no treatment (control group). Progression-free survival (PFS), overall survival (OS), and adverse effects were compared.ResultsForty-nine patients were recruited in this study, with 19 patients in the CIT group and 30 patients in the control group. The patient characteristics of the 2 groups were comparable except for age, as patients in the CIT group were older than those in the control group (P < 0.05). PFS in the CIT group was superior to the control group (5 vs. 3.1 months, P = 0.020; HR, 0.489, 95% CI, 0.264–0.909, P = 0.024). OS of the CIT group was also longer than that of the control group (13.3 vs. 8.2 months, P = 0.044; HR, 0.528, 95% CI, 0.280–0.996, P = 0.048, respectively). No significant adverse reactions occurred in patients undergoing CIT.ConclusionsCIT maintenance therapy in ES-SCLC prolonged survival with only minimal side effects. Integrating CIT into the current treatment may be a novel strategy for ES-SCLC patients, although further multi-center randomized trials are needed

Is hepatic resection always a better choice than radiofrequency ablation for solitary hepatocellular carcinoma regardless of age and tumor size?

In this study, we aimed to compare survival outcomes after receiving radiofrequency ablation (RFA) and hepatic resection (HR) for solitary hepatocellular carcinoma (HCC) with stratification by tumor size and age. A retrospective cohort was obtained from the Surveillance, Epidemiology, and End Results (SEER) database from 2004 to 2015. Patients were grouped by tumor size (0-2, 2-5, and > 5 cm) and age (>65 and ≤65). Overall survival (OS) and disease-specific survival (DSS) were assessed. For patients >65 with tumors measuring 0-2 and 2-5 cm, the HR group had better OS and DSS compared with the RFA group. For patients >65 with tumors > 5 cm, OS and DSS did not differ significantly between the RFA and HR groups (p = 0.262 and p = 0.129, respectively). For patients ≤65, the HR group had better OS and DSS compared with the RFA group regardless of tumor size. For patients with resectable solitary HCC, regardless of age, HR is the better choice not only for tumors ≤ 2 cm, but also for tumors 2-5 cm. For resectable solitary HCC with tumors ＞5 cm, HR is the better choice for patients ≤65 but for patients >65, the issue of treatment choice needs to be further studied

State owned enterprises as bribe payers: the role of institutional environment

Our paper draws attention to a neglected channel of corruption—the bribe payments by state-owned enterprises (SOEs). This is an important phenomenon as bribe payments by SOEs fruitlessly waste national resources, compromising public welfare and national prosperity. Using a large dataset of 30,249 firms from 50 countries, we show that, in general, SOEs are less likely to pay bribes for achieving organizational objectives owing to their political connectivity. However, in deteriorated institutional environments, SOEs may be subjected to potential managerial rent-seeking behaviors, which disproportionately increase SOE bribe propensity relative to privately owned enterprises. Specifically, our findings highlight the importance of fostering democracy and rule of law, reducing prevalence of corruption and shortening power distance in reducing the incidence of SOE bribery