7,401 research outputs found
RNA polymerase II stalling: loading at the start prepares genes for a sprint
Promoter-proximal polymerase II stalling prepares genes for prompt expression when signals are received
Geochemical modeling of groundwater in southern plain area of Pengyang County, Ningxia, China
AbstractThe purpose of this paper is to examine the evolution mechanisms of a hydrochemical field and to promote its benefits to the living standards of local people and to the local economy in the southern plain area of Pengyang County, in Ningxia, China. Based on understanding of the hydrogeological conditions in Pengyang County, the chemical evolution characteristics of groundwater in the plain area were analyzed. PHREEQC geochemical modeling software was used to perform hydrochemical modeling of water-rock interaction and to quantitatively analyze the evolution processes and the formation mechanisms of the local groundwater. Geochemical modeling was performed for two groundwater paths. The results showed that, along path 1, Na+ adsorption played the leading role in the precipitation process and its amount was the largest, up to 6.08 mmol/L; cation exchange was significant along path 1, while along simulated path 2, albite accounted for the largest amount of dissolution, reaching 9.06 mmol/L, and the cation exchange was not significant. According to the modeling results, along the groundwater flow path, calcite and dolomite showed oversaturated status with a precipitation trend, while the fluorite and gypsum throughout the simulated path were not saturated and showed a dissolution trend. The total dissolved solids (TDS) increased and water quality worsened along the flow path. The dissolution reactions of albite, CO2, and halite, the exchange adsorption reaction of Na+, and the precipitation of sodium montmorillonite and calcite were the primary hydrogeochemical reactions, resulting in changes of hydrochemical ingredients
The heme-p53 interaction: Linking iron metabolism to p53 signaling and tumorigenesis
Recently, we reported that heme binds to tumor suppressor p53 protein (TP53, best known as p53) and promotes its nuclear export and cytosolic degradation, whereas iron chelation stabilizes p53 protein and suppresses tumors in a p53-dependent manner. This not only provides mechanistic insights into tumorigenesis associated with iron excess, but also helps guide the administration of chemotherapy based on iron deprivation in the clinic
ABSORB: Atlas building by self-organized registration and bundling
To achieve more accurate and consistent registration in an image population, a novel hierarchical groupwise registration framework, called Atlas Building by Self-Organized Registration and Bundling (ABSORB), is proposed in this paper. In this new framework, the global structure, i.e., the relative distribution of subject images is always preserved during the registration process by constraining each subject image to deform only locally with respect to its neighbors within the learned image manifold. To achieve this goal, two novel strategies, i.e., the self-organized registration by warping one image towards a set of its eligible neighbors and image bundling to cluster similar images, are specially proposed. By using these two strategies, this new framework can perform groupwise registration in a hierarchical way. Specifically, in the high level, it will perform on a much smaller dataset formed by the representative subject images of all subgroups that are generated in the previous levels of registration. Compared to the other groupwise registration methods, our proposed framework has several advantages: 1) It explores the local data distribution and uses the obtained distribution information to guide the registration; 2) The possible registration error can be greatly reduced by requiring each individual subject to move only towards its nearby subjects with similar structures; 3) It can produce a smoother registration path, in general, from each subject image to the final built atlas than other groupwise registration methods. Experimental results on both synthetic and real datasets show that the proposed framework can achieve substantial improvements, compared to the other two widely used groupwise registration methods, in terms of both registration accuracy and robustness
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