JFRC2 Template Brain

<p>This single female brain was generated by Arnim Jenett (Janelia Farm Research Campus) and is stained with the neuropil marker nc82. <strong>If you make use of this data, please cite:</strong></p> <p><strong>A GAL4-Driver Line Resource for Drosophila Neurobiology</strong><br> Arnim Jenett, Gerald M. Rubinemail, Teri-T.B. Ngo, David Shepherd, Christine Murphy, Heather Dionne, Barret D. Pfeiffer, Amanda Cavallaro, Donald Hall, Jennifer Jeter, Nirmala Iyer, Dona Fetter, Joanna H. Hausenfluck, Hanchuan Peng, Eric T. Trautman, Robert R. Svirskas, Eugene W. Myers, Zbigniew R. Iwinski, Yoshinori Aso, Gina M. DePasquale, Adrianne Enos, Phuson Hulamm, Shing Chun Benny Lam, Hsing-Hsi Li, Todd R. Laverty, Fuhui Long, Lei Qu, Sean D. Murphy, Konrad Rokicki, Todd Safford, Kshiti Shaw, Julie H. Simpson, Allison Sowell, Susana Tae, Yang Yu, Christopher T. Zugates<br> http://dx.doi.org/10.1016/j.celrep.2012.09.011</p> <p>The original image had an XY resolution of 0.622088 microns × 0.622088 microns and a 1 micron slice spacing. It was then upsampled in Z to give isotropic voxels. When received from Janelia Farm the image had no spatial calibration and was in tif format. The image was opened in Fiji/ImageJ and the voxel size set to 0.622088 microns × 0.622088 microns × 0.622088 microns, based on a personal communication from Arnim Jenett and inspection of the image data associated with http://dx.doi.org/10.1016/j.celrep.2012.09.011 that is available at http://flweb.janelia.org/cgi-bin/flew.cgi. The image was then saved in gzip encoded nrrd format using the ImageJ Nrrd_Writer plugin.</p

VNCIS1 ventral nerve cord template

<p>An intersex, nc82-stained averaged ventral nerve cord constructed from 29 male and 21 female brains. Voxel size: (0.43, 0.43, 1.06) microns. <strong>If you make use of this data, please cite:</strong></p> <p>Sexual Dimorphism in the Fly Brain<br> Sebastian Cachero, Aaron D. Ostrovsky, Jai Y. Yu, Barry J. Dickson, Gregory S.X.E. Jefferis<br> http://dx.doi.org/10.1016/j.cub.2010.07.045</p

Drosophila virilis template brains

<p>Male and female symmetric averaged templates (10 and 11 brains, respectively) and intersex template brain for <em>Drosophila virilis</em>. Voxel size: (0.461, 0.461, 1) micron. Individual brains were imaged with a Zeiss 710 confocal microscope using an EC Plan-Neofluar 40 × / 1.30 NA oil objective and zoom factor 0.6, with the resulting images being stitched together using the 'Pairwise stitching' plugin of Fiji.</p

Drosophila melanogaster template brains

<p>Male and female symmetric averaged templates (18 and 14 brains, respectively) and intersex template brain for <em>Drosophila melanogaster</em>. Voxel size: (0.461, 0.461, 1) micron.</p

Cell07 Template Brain

<p><strong>If you make use of this data, please cite:</strong></p> <p><strong>Comprehensive Maps of Drosophila Higher Olfactory Centers: Spatially Segregated Fruit and Pheromone Representation</strong><br> Gregory S.X.E. Jefferis, Christopher J. Potter, Alexander M. Chan, Elizabeth C. Marin, Torsten Rohlfing, Calvin R. Maurer Jr., Liqun Luo<br> http://dx.doi.org/10.1016/j.cell.2007.01.040</p> <p> </p> <p>This intersex, averaged template brain is an average of 16 co-registered, nc82-stained brains. The initial seed brain was female; 13 additional female and 2 male brains were registered to this seed and then all 16 were averaged. The reference includes the dorsal posterior quarter of the left brain hemisphere, a volume of approximately 168 × 168 × 87 microns cubed.</p

T1 Template Brain

<p> <strong>If you make use of this data, please cite:</strong></p> <p><strong>Cellular Organization of the Neural Circuit that Drives Drosophila Courtship Behavior</strong><br> Jai Y. Yu, Makoto I. Kanai, Ebru Demir, Gregory S. X. E. Jefferis, Barry J. Dickson<br> http://dx.doi.org/10.1016/j.cub.2010.08.025</p> <p>A nrrd version of the original intersex template brain available from http://brainbase.imp.ac.at/bbweb, consisting of an average of 45 brains. Voxel size: (0.5488761, 0.5488761, 1) microns.</p