3 research outputs found

    Additional file 3: Figure S1. of Characterization of a novel aspartyl protease inhibitor from Haemonchus contortus

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    Amplification efficiencies of target gene (API) and endogenous reference (β-Tubulin) gene were verified to be similar by real time PCR. Figure S2. Amplification efficiencies of target genes (IL-2, IL-4, IL-10, Il-17, IFN-γ and TGF-β) and endogenous reference (β-Actin) gene were verified to be similar by real time PCR. (DOCX 57 kb

    Additional file 1: Figure S1. of Arginine kinase from Haemonchus contortus decreased the proliferation and increased the apoptosis of goat PBMCs in vitro

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    Cloning and expression of Hc-AK gene. The recombinant plasmid pMD19T-AK (a) and expression plasmid pET32a (+)-AK (b), were verified by restriction digestion with BamH I and EcoR I. Figure S2. Multiple sequence alignment of Hc-AK. Amino acid sequence of Hc-AK with that from other species, H. contortus (CDJ90032), C. briggsae (XP_002645008), C. brenneri (EGT52941), C. elegans (NP_509217), H. glycines (AAO49799), O. dentatum (KHJ89945), A. duodenale (KIH65495), D. viviparus (KJH41917), V. pacos (XP_006219889) and N. americanus (XP_013303820) using CLUSTAL W method and GeneDoc ( http://www.psc.edu/biomed/genedoc/ ). Figure S3. Phylogenetic analysis for Hc-AK gene. A phylogenetic tree was constructed by neighbour -joining method to verify relationships between the amino acid of Hc-AK to that of other nematode species, using MEGA ver. 6.1 programme. Figure S4. N-terminal signal peptide prediction. The amino acid sequences of Hc-AK (NCBI accession numbers: JX422018.1 was used to predict N-terminal signal peptides by SignalP 4.1 Server. Figure S5. Membrane protein prediction by using TMHMM Server v.2.0. The amino acid sequences of Hc-AK (NCBI accession numbers: JX422018.1) was analysed to predict transmembrane structures using TMHMM Server v.2.0. There were no transmembrane domains predicted in this protein structure. http://www.cbs.dtu.dk/services/TMHMM/ . Figure S6. Prediction of B and T cell epitopes. Protein sequence of Hc-AK (NCBI accession numbers: JX422018.1) was used for the prediction of the B cell and T cell epitopes, that revealed 16 peptides of B cell epitopes and 17 T cell epitopes. (DOCX 736 kb
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