14 research outputs found

    Role of calcium in AMF-mediated alleviation of the adverse impacts of cadmium stress in Bassia indica [Wight] A.J. Scott

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    The aim of this study was to evaluate cadmium stress induced changes in the growth, lipid peroxidation and antioxidant activity of Bassia indica associated with arbuscular mycorrhizal fungi (AMF) and their amelioration by calcium application. Cadmium stress can cause alterations in the physiological and biochemical processes in plants. A calcium application combined with an AMF treatment resulted in the reduction of lipid peroxidation and the production of hydrogen peroxide, thereby mediating the mitigation of cadmium induced oxidative stress. The activity of antioxidant enzymes increased with cadmium application, whereas AMF inoculation combined with a calcium application further enhanced their activity. An increase in the content of non-enzymatic antioxidants such as ascorbate, reduced glutathione (GSH), oxidized glutathione (GSSG) and S-nitrosoglutathione (GSNO) in AMF-inoculated and calcium-treated plants further suggests their role in strengthening the antioxidant defense system that results in maintained growth. The application of calcium combined with the AMF treatment caused a significant reduction in lipid peroxidation and in the production of hydrogen peroxide, thereby mediating the mitigation of the cadmium induced oxidative stress. Increased proline accumulation was clearly evident in stressed plants, and the calcium application as well as the AMF inoculation further induced proline synthesis, thereby providing efficient protection against cadmium stress by increasing the maintenance of the systemic resistance criteria

    Role of calcium in AMF-mediated alleviation of the adverse impacts of cadmium stress in Bassia indica [Wight] A.J. Scott

    No full text
    The aim of this study was to evaluate cadmium stress induced changes in the growth, lipid peroxidation and antioxidant activity of Bassia indica associated with arbuscular mycorrhizal fungi (AMF) and their amelioration by calcium application. Cadmium stress can cause alterations in the physiological and biochemical processes in plants. A calcium application combined with an AMF treatment resulted in the reduction of lipid peroxidation and the production of hydrogen peroxide, thereby mediating the mitigation of cadmium induced oxidative stress. The activity of antioxidant enzymes increased with cadmium application, whereas AMF inoculation combined with a calcium application further enhanced their activity. An increase in the content of non-enzymatic antioxidants such as ascorbate, reduced glutathione (GSH), oxidized glutathione (GSSG) and S-nitrosoglutathione (GSNO) in AMF-inoculated and calcium-treated plants further suggests their role in strengthening the antioxidant defense system that results in maintained growth. The application of calcium combined with the AMF treatment caused a significant reduction in lipid peroxidation and in the production of hydrogen peroxide, thereby mediating the mitigation of the cadmium induced oxidative stress. Increased proline accumulation was clearly evident in stressed plants, and the calcium application as well as the AMF inoculation further induced proline synthesis, thereby providing efficient protection against cadmium stress by increasing the maintenance of the systemic resistance criteria. Keywords: Bassia indica, Cadmium, Calcium, AMF, Acquired systemic resistanc

    Sentiment Analysis of Short Texts Using SVMs and VSMs-Based Multiclass Semantic Classification

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    ABSTRACTIn our approach, a hybrid machine learning model is proposed which uses Enhanced Vector Space Model (EVSM) along with Hybrid Support Vector Machine (HSVM) classifier. Initially the social media-based information is retrieved using Enhanced Vector Space Model (EVSM). EVSMs are employed in order to characterize the text content by mapping them into high-dimensional vector spaces, capturing the relationships between words and their contextual meanings. Rigorous feature selection methods are employed to designate texts for review, and a multiclass semantic classification algorithm, specifically the HSVM classifier, is utilized for categorization. Decision tree algorithm is used along with SVM to refine the selection process. To enhance sentiment analysis accuracy, sentiment dictionaries are not only presented but also extended through the expansion of Stanford’s GloVE tool. To enhance precision, the proposed work introduces weight-enhancing methods for processing renowned text weights. Sentiments are classified into positive, negative, and neutral categories. Notably, the achieved results demonstrate improved accuracy, attributed to the incorporation of an emotional sentiment enhancement factor for determining weights and leveraging sentiment dictionaries for word availability. The accuracy is obtained to be 92.78% with 91.33% positive sentiment rate and 97.32% negative sentiment rate

    Phylogenetic affiliation and determination of bioactive compounds of bacterial population associated with organs of mud crab, Scylla olivacea

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    Mud crab belongs to the genus Scylla is an economically valuable and preferred species for costal aquaculture in Asian countries, including India. In recent years, there has been a tremendous expansion of Scylla farming, which has led to increasing research on its habit and habitats. However, there has been no study undertaken to understand the role of the bacterial population associated with the different organs of the mud crab, Scylla olivacea. In total, 43 isolates were recovered from four selected parts of the crab (carapace, n = 18; abdomen n = 11; leg, n = 8; and hand, n = 6), and the 16S rRNA gene was used to identify the bacterial isolates. The antimicrobial potential along with the detection of modular polyketide synthase (PKSI), cytochrome P450 hydroxylase (CYP) and non-ribosomal peptide synthetase (NRPS) gene clusters were investigated to show a relationship among the biosynthetic genes with their useful aspects. Additionally, the potential three strains (BPSCRB12, BPSCRB14 and BPSCRB41), which showed significant antimicrobial activities, also showed the presence of twenty volatile compounds (VOCs) using GC–MS analysis. We conclude that the strain Aneurinibacillus aneurinilyticus BPSCRB41 could be source for the production of bioactive compounds

    Effect of MHC Linked 7-Gene Signature on Delayed Hepatocellular Carcinoma Recurrence

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    Dysregulated immune response significantly affects hepatocellular carcinoma’s (HCC) prognosis. Human Leukocyte Antigens are key in devising immune responses against HCC. Here, we investigated how HLAs modulate HCC development at the transcriptomic level. RNA-seq data of 576 patients from two independent cohorts was retrieved. The clinicopathological relevance of all HLA genes was investigated using Fisher-Exact, correlation, and Kaplan–Meier and cox regression survival tests. Clustering of ~800 immune-related genes against HLAs was completed using a ward-agglomerative method. Networks were generated using 40 HLA associated unique genes and hub genes were investigated. HLAs including HLA-DMA, HLA-DMB, HLA-DOA and HLA-DRB6 were associated with delayed recurrence in both discovery (204 HCC cases) and validation (372 HCC cases) cohorts. Clustering analyses revealed 40 genes associated with these four HLAs in both cohorts. A set of seven genes (NCF4, TYROBP, LCP2, ZAP70, PTPRC, FYN and WAS) was found co-expressed at gene–gene interaction level in both cohorts. Furthermore, survival analysis revealed seven HLA-linked genes as predictors of delayed recurrence. Multivariate analysis also predicted that mean expression of 7-gene is an independent predictor of delayed recurrence in both cohorts. We conclude that the expression of 7-gene signature may lead to improved patient prognosis. Further studies are required for consideration in clinical practice

    Endophytic bacterium Bacillus subtilis (BERA 71) improves salt tolerance in chickpea plants by regulating the plant defense mechanisms

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    Plant growth-promoting endophytic bacteria can stimulate the growth, nutrient acquisition, symbiotic performance and stress tolerance of chickpea plants under saline soil conditions. The aim of this study was to investigate the stress-adaptive mechanisms of chickpea plants mediated by Bacillus subtilis (BERA 71) under saline conditions. Inoculation with BERA 71 enhanced plant biomass and the synthesis of photosynthetic pigments and reduced the levels of reactive oxygen species (ROS) and lipid peroxidation in plants under conditions of stress. Furthermore, the activities of ROS-scavenging antioxidant enzymes (superoxide dismutase, peroxidase, catalase and glutathione reductase), the levels of non-enzymatic antioxidants (ascorbic acid and glutathione) and the total phenol content were increased in stressed plants during bacterial association. The bacteria decreased sodium accumulation and enhanced the nitrogen, potassium, calcium and magnesium content in the plants. The suppression of ROS generation and of lipid peroxidation and the accumulation of proline in BERA-71-inoculated plants enhanced the membrane stability under salinity stress and non-stress conditions
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