Enhancing Biodiversity and Multifunctionality of an Organic Farmscape in California’s Central Valley

Organic farmers in the USA increasingly manage the margins of previously monocultured farmed landscapes to increase biodiversity, e.g. they restore and protect riparian corridors, plant hedgerows and construct vegetated tailwater ponds. This study attempts to link habitat enhancements, biodiversity and changes in ecosystem functions by: 1. inventorying the existing biodiversity and the associated belowground community structure and composition in the various habitats of an organic farm in California’s Central Valley; and 2. monitoring key ecosystem functions of these habitats. Two years of inventories show greater native plant diversity in non-cropped areas. While nematode diversity did not differ between habitats, functional groups were clearly associated with particular habitats as were soil microbial communities (phospholipid fatty acid analysis). Earthworm diversity did not differ between habitats, but biomass was higher in non-cropped areas. Habitats with woody vegetation stored 20% of the farmscape’s total carbon (C), despite their relatively small size (only 5% of the total farm). Two years of monitoring data of farmscape C and nitrogen (N) through emissions, run-off and leaching showed distinct tradeoffs in function associated with each habitat. Clearly habitat restoration in field margins will increase both landscape biodiversity and the multifunctionality of the farmscape as a whole

A survey of boat-based recreational fishing in inner Shark Bay 2016/17

Monitoring the temporal and spatial variability in recreational fishing provides necessary information for assessing resource sustainability, monitoring resource allocation and informing fisheries management. This is particularly important in inner Shark Bay because recreational fishing occurs in a World Heritage Area and Marine Park. The majority of boat-based recreational fishers in inner Shark Bay target Pink Snapper (Chrysophrys auratus) and three genetically distinct stocks of this species occur in the Denham Sound, Eastern Gulf and Freycinet Estuary Management Zones

Integrated survey of boat-based recreational fishing in inner Shark Bay 2018/19

Inner Shark Bay is a popular recreational fishing destination. As recreational fishing occurs in a World Heritage Area and Marine Park, there is a need for ongoing reliable information on catches. Many boat-based recreational fishers in inner Shark Bay target Pink Snapper (Chrysophrys auratus)

Delay Equations and Radiation Damping

Starting from delay equations that model field retardation effects, we study the origin of runaway modes that appear in the solutions of the classical equations of motion involving the radiation reaction force. When retardation effects are small, we argue that the physically significant solutions belong to the so-called slow manifold of the system and we identify this invariant manifold with the attractor in the state space of the delay equation. We demonstrate via an example that when retardation effects are no longer small, the motion could exhibit bifurcation phenomena that are not contained in the local equations of motion.Comment: 15 pages, 1 figure, a paragraph added on page 5; 3 references adde

Background Thermal Contributions in Testing the Unruh Effect

We consider inertial and accelerated Unruh-DeWitt detectors moving in a background thermal bath and calculate their excitation rates. It is shown that for fast moving detectors such a thermal bath does not affect substantially the excitation probability. Our results are discussed in connection with a possible proposal of testing the Unruh effect in high energy particle accelerators.Comment: 13 pages, (REVTEX 3.0), 3 figures available upon reques

Potent Trivalent Inhibitors of Thrombin through Hybridization of Salivary Sulfopeptides from Hematophagous Arthropods

Blood feeding arthropods, such as leeches, ticks, flies and mosquitoes, provide a privileged source of peptidic anticoagulant molecules. These primarily operate through inhibition of the central coagulation protease thrombin by binding to the active site and either exosite I or exosite II. Herein, we describe the rational design of a novel class of trivalent thrombin inhibitors that simultaneously block both exosites as well as the active site. These engineered hybrids were synthesized using tandem diselenide-selenoester ligation (DSL) and native chemical ligation (NCL) reactions in one-pot. The most potent trivalent inhibitors possessed femtomolar inhibition constants against alpha-thrombin and were selective over related coagulation proteases. A lead hybrid inhibitor possessed potent anticoagulant activity, blockade of both thrombin generation and platelet aggregation in vitro and efficacy in a murine thrombosis model at 1 mg kg(-1). The rational engineering approach described here lays the foundation for the development of potent and selective inhibitors for a range of other enzymatic targets that possess multiple sites for the disruption of protein-protein interactions, in addition to an active site

Scaling analysis of electron transport through metal-semiconducting carbon nanotube interfaces: Evolution from the molecular limit to the bulk limit

We present a scaling analysis of electronic and transport properties of metal-semiconducting carbon nanotube interfaces as a function of the nanotube length within the coherent transport regime, which takes fully into account atomic-scale electronic structure and three-dimensional electrostatics of the metal-nanotube interface using a real-space Green's function based self-consistent tight-binding theory. As the first example, we examine devices formed by attaching finite-size single-wall carbon nanotubes (SWNT) to both high- and low- work function metallic electrodes through the dangling bonds at the end. We analyze the nature of Schottky barrier formation at the metal-nanotube interface by examining the electrostatics, the band lineup and the conductance of the metal-SWNT molecule-metal junction as a function of the SWNT molecule length and metal-SWNT coupling strength. We show that the confined cylindrical geometry and the atomistic nature of electronic processes across the metal-SWNT interface leads to a different physical picture of band alignment from that of the planar metal-semiconductor interface. We analyze the temperature and length dependence of the conductance of the SWNT junctions, which shows a transition from tunneling- to thermal activation-dominated transport with increasing nanotube length. The temperature dependence of the conductance is much weaker than that of the planar metal-semiconductor interface due to the finite number of conduction channels within the SWNT junctions. We find that the current-voltage characteristics of the metal-SWNT molecule-metal junctions are sensitive to models of the potential response to the applied source/drain bias voltages.Comment: Minor revision to appear in Phys. Rev. B. Color figures available in the online PRB version or upon request to: [email protected]

Persistent currents in a Bose-Einstein condensate in the presence of disorder

We examine bosonic atoms that are confined in a toroidal, quasi-one-dimensional trap, subjected to a random potential. The resulting inhomogeneous atomic density is smoothened for sufficiently strong, repulsive interatomic interactions. Statistical analysis of our simulations show that the gas supports persistent currents, which become more fragile due to the disorder.Comment: 5 pages, RevTex, 3 figures, revised version, to appear in JLT

Charge and Current Sum Rules in Quantum Media Coupled to Radiation

This paper concerns the equilibrium bulk charge and current density correlation functions in quantum media, conductors and dielectrics, fully coupled to the radiation (the retarded regime). A sequence of static and time-dependent sum rules, which fix the values of certain moments of the charge and current density correlation functions, is obtained by using Rytov's fluctuational electrodynamics. A technique is developed to extract the classical and purely quantum-mechanical parts of these sum rules. The sum rules are critically tested in the classical limit and on the jellium model. A comparison is made with microscopic approaches to systems of particles interacting through Coulomb forces only (the non-retarded regime). In contrast with microscopic results, the current-current correlation function is found to be integrable in space, in both classical and quantum regimes.Comment: 19 pages, 1 figur