CORE
🇺🇦
make metadata, not war
Services
Services overview
Explore all CORE services
Access to raw data
API
Dataset
FastSync
Content discovery
Recommender
Discovery
OAI identifiers
OAI Resolver
Managing content
Dashboard
Bespoke contracts
Consultancy services
Support us
Support us
Membership
Sponsorship
Community governance
Advisory Board
Board of supporters
Research network
About
About us
Our mission
Team
Blog
FAQs
Contact us
Filters
18 research outputs found
Genetic sequence-based prediction of long-range chromatin interactions suggests a potential role of short tandem repeat sequences in genome organization
Author
A Malaspina
A Sanyal
+38 more
A Tanay
BE Boser
C Elkan
C Widmer
E de Wit
E Lieberman-Aiden
F Ay
G Rätsch
G Rätsch
H Hamada
J Dekker
J Dekker
J Dostie
J Harrow
JO Yáñez-Cuna
JR Dixon
JR Hughes
KJ Brookes
L Jacob
M Simonis
MJ Fullwood
MJ Zeitz
N Cope
N Heidari
N Varoquaux
Nico Pfeifer
P Meinicke
P Vogt
R Edgar
S Ramamoorthy
Sarvesh Nikumbh
SSP Rao
T Evgeniou
T Evgeniou
T Lingner
TD Schneider
WA Bickmore
Z Zhao
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
Full text link
Crossref
The cohesin release factor WAPL restricts chromatin loop extension
Author
Amendola M
Blomen VA
+12 more
Brummelkamp TR
de Wit E
Haarhuis JHT
Krijger PHL
Medema RH
Rowland BD
Teunissen H
van der Weide RH
van Ruiten MS
van Ruiten MS
van Steensel B
Yáñez-Cuna JO
Publication venue
'Elsevier BV'
Publication date
01/01/2017
Field of study
No full text
Archivio Istituzionale della Ricerca- Università degli Studi di Foggia
Enhancer–core-promoter specificity separates developmental and housekeeping gene regulation
Author
A Hochheimer
AK Kutach
+40 more
AR Quinlan
B Langmead
B Lenhard
BD Pfeiffer
BV Gurudatta
C Merli
CD Arnold
CD Arnold
D Shlyueva
D Smith
E Soler
EZ Kvon
F Müller
H Kwak
J Banerji
J Sharpe
J Zeitlinger
JA D’Alessio
JE Butler
JO Yáñez-Cuna
JO Yáñez-Cuna
JT Kadonaga
K Chen
K Saito
M Ashburner
M Lagha
M Levine
MDE Deato
P Tomancak
PC FitzGerald
PG Engström
S Ohtsuki
TJ Parry
TL Bailey
U Ohler
U Ohler
VR Chintapalli
X Li
Y Isogai
Y-L Wang
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Genome-scale functional characterization of Drosophila developmental enhancers in vivo
Author
A Erives
A Jenett
+55 more
A Jory
A Ochoa-Espinosa
A Stark
A Visel
A Visel
Alexander Stark
AR Quinlan
Barry J. Dickson
BD Pfeiffer
BD Pfeiffer
BR Graveley
C-Y Nien
Drosophila 12 Genomes Consortium
E Frise
E Lécuyer
Evgeny Z. Kvon
EZ Kvon
Gerald Stampfel
GM Rubin
H-L Liang
HT Nguyen
J Jack
J Zeitlinger
J-W Hong
J. Omar Yáñez-Cuna
JA Campos-Ortega
JO Yáñez-Cuna
JO Yáñez-Cuna
JR Nambu
K Gajewski
Katharina Schernhuber
L Manning
LA Pennacchio
M Levine
M Marinić
Michaela Pagani
MK Baylies
MM Harrison
MW Perry
N Nègre
P Tomancak
R Weiszmann
RK Maeda
RP Zinzen
S Bonn
S Small
S Thomas
SE St Pierre
SM Gallo
T Sexton
Tomas Kazmar
V Hartenstein
VC Calhoun
WW Fisher
Y Shen
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Short DNA sequence patterns accurately identify broadly active human enhancers
Author
A Bird
A Kundaje
+46 more
A Visel
A Yates
A Yates
AP Boyle
AP Boyle
AR Quinlan
BK Fortini
C Cheng
C Pizzi
CD Arnold
CE Grant
D Lee
D Shlyueva
DE Bauer
DS Johnson
ENCODE Project Consortium
F Lyko
GM Burzynski
I Dror
I Guyon
J Ernst
J Korhonen
JA Capra
JO Yáñez-Cuna
JO Yáñez-Cuna
John A. Capra
K Jabbari
K Musunuru
KR Nitta
L Narlikar
L Taher
Laura L. Colbran
Ling Chen
M Ghandi
M Levine
MB Gerstein
MT Maurano
MT Weirauch
O Corradin
P Kheradpour
R Andersson
RE Thurman
S Smemo
S Sonnenburg
T Ravasi
T Shiraki
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Opening up the blackbox: an interpretable deep neural network-based classifier for cell-type specific enhancer predictions
Author
A Visel
AM Bushey
+47 more
Ananth Grama
AP Boyle
AR Quinlan
BE Bernstein
BP Berman
C-T Ong
CE Romanoski
Chih-Hao Fang
D Kleftogiannis
D Shlyueva
D Wang
E Calo
E Korzus
F Spitz
G Hinton
GE Hinton
HA Firpi
HM Chan
I Krivega
J Banerji
J Ngiam
JO Yáñez-Cuna
JO Yáñez-Cuna
JP Noonan
K-J Won
L Maaten Van der
LA Lettice
LA Pennacchio
M Bulger
M Bulger
M Fernández
M Levine
M Mohrs
Mrudul Harwani
N Rajagopal
N Rusk
N Srivastava
Nawanol Theera-Ampornpunt
ND Heintzman
ND Heintzman
P Leray
PJ Farnham
Seong Gon Kim
Somali Chaterji
T Barrett
TEP Consortium
TF Consortium
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Genome-Wide Ultrabithorax Binding Analysis Reveals Highly Targeted Genomic Loci at Developmental Regulators and a Potential Connection to Polycomb-Mediated Regulation
Author
A Lopez
A McCormick
+86 more
A Pavlopoulos
A Scuderi
A-SK Tseng
ACA Meireles-Filho
AF Bardet
Alexander Stark
AM Boulet
Antonio C. A. Meireles-Filho
AP Gould
AP Gould
B Gebelein
B Langmead
B Papp
B Schuettengruber
C Kwong
D Hnisz
D Park
Daria Shlyueva
DI Strutt
DL Garaulet
E de Boer
E Hafen
E Kurant
EB Lewis
EZ Kvon
EZ Kvon
F Grosveld
F Spitz
G Struhl
G Struhl
G Strübbe
I Lohmann
J Betschinger
J Bischof
J Huang
J Müller
J Salvaing
J Sonoda
J Zeitlinger
JC Pearson
JO Yáñez-Cuna
JO Yáñez-Cuna
K Oktaba
K Poorey
KJT Venken
L Gutiérrez
L Ringrose
L Ringrose
L Teytelman
M Bienz
M Capovilla
M Ronshaugen
M Slattery
MA Zabidi
MD Biggin
Michaela Pagani
Moises Mallo
N Nègre
P Mohit
P Tomancak
PA Steffen
R Galant
RP Kühnlein
RP Zinzen
RS Mann
S Beck
S Bonn
S Calgaro
S Petruk
S Roy
S Sorge
SD Hueber
SD Hueber
SD Weatherbee
SW Choo
T Sandmann
TA Down
TC Kaufman
TL Bailey
U Hinz
U Weihe
W McGinnis
WJ Gong
WJ Kent
Y Li X-
YB Schwartz
Publication venue
'Public Library of Science (PLoS)'
Publication date
Field of study
No full text
Crossref
FAST-1 antisense RNA epigenetically alters FXN expression
Author
A Dürr
A Rotig
+44 more
A Saveliev
A Werner
AM Silva
C Davidovich
D Herman
D Holoch
D Kumari
DW Chung
E Grabczyk
E Greene
E Kim
E Soragni
E Soto-Reyes
F Colin
I Biase De
I Castaldo
I Kruijsbergen van
J Zhao
JE Phillips
JH Willis
JO Yáñez-Cuna
K Li
L Guelen
M Leeb
M Oti
M Pandolfo
M Pandolfo
M Rai
M Witcher
MV Evans‐Galea
N Sakamoto
O Khorkova
P Halley
P Lefevre
S Al-Mahdawi
S Al-Mahdawi
T Ohhata
V Campuzano
V Campuzano
V Pelechano
VE Villegas
Wenqiang Yu
YK Chutake
Z Hu
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
Assessing the model transferability for prediction of transcription factor binding sites based on chromatin accessibility
Author
A Arvey
AP Boyle
+51 more
AP Boyle
AR Quinlan
AV Morozov
CE Grant
Consortium EP
Cristina Zibetti
DT Holloway
E Wingender
EG Gusmao
EG Gusmao
F Pedregosa
G Cuellar-Partida
GE Crawford
GG Yardimci
Guohua Wang
HH He
J Ernst
J Kähärä
J Piper
JD Buenrostro
JD Buenrostro
Jiang Qian
JO Yáñez-Cuna
JR Hesselberth
Jun Wan
KR Rosenbloom
KR Rosenbloom
L Breiman
L Yang
M Tompa
MH Sung
MT Weirauch
PJ Sabo
Q Qin
Q Zhou
R Pique-Regi
RI Sherwood
S Kumar
S Mahony
S Mahony
S Mahony
S Neph
Seth Blackshaw
Sheng Liu
T Zhou
TL Bailey
WJ Kent
WJ Kent
X Yu
X Yu
YM Oh
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
CBP binding outside of promoters and enhancers in Drosophila melanogaster
Author
A Rada-Iglesias
A Visel
+55 more
Allison M. Churcher
Ann Boija
BR Graveley
C Das
C Feller
CD Arnold
D Pasini
David J. Meyers
DC Bedford
DW Huang
DW Huang
EM Bowers
EZ Kvon
F Huang
F Tie
F Tie
GE Zentner
H Masai
H Shen
I Comet
JH Roelfsema
JO Yáñez-Cuna
KH McConnell
L Bodai
L Wang
M Erokhin
Mattias Mannervik
MB Eisen
MP Creyghton
N Nègre
ND Heintzman
NG Iyer
P Kolovos
P Philip
Per Stenberg
PH Holmqvist
PH Holmqvist
Philge Philip
Philip A. Cole
RH Goodman
Roshan Vaid
S Petruk
S Roy
S Smolik
S Sofueva
S Tweedie
T Lilja
T Lilja
VS Chopra
Y Rikitake
YB Schwartz
YB Schwartz
YB Schwartz
Z Misulovin
Z Wang
Publication venue
'Springer Science and Business Media LLC'
Publication date
Field of study
No full text
Crossref
1
2