5,847 research outputs found
Association screening for genes with multiple potentially rare variants: an inverse-probability weighted clustering approach
Both common variants and rare variants are involved in the etiology of most complex diseases in humans. Developments in sequencing technology have led to the identification of a high density of rare variant single-nucleotide polymorphisms (SNPs) on the genome, each of which affects only at most 1% of the population. Genotypes derived from these SNPs allow one to study the involvement of rare variants in common human disorders. Here, we propose an association screening approach that treats genes as units of analysis. SNPs within a gene are used to create partitions of individuals, and inverse-probability weighting is used to overweight genotypic differences observed on rare variants. Association between a phenotype trait and the constructed partition is then evaluated. We consider three association tests (one-way ANOVA, chi-square test, and the partition retention method) and compare these strategies using the simulated data from the Genetic Analysis Workshop 17. Several genes that contain causal SNPs were identified by the proposed method as top genes
Heavily electron-doped electronic structure and isotropic superconducting gap in AxFe2Se2 (A=K,Cs)
The low energy band structure and Fermi surface of the newly discovered
superconductor, AxFe2Se2 (A=K,Cs), have been studied by angle-resolved
photoemission spectroscopy. Compared with iron pnictide superconductors,
AxFe2Se2 (A=K,Cs) is the most heavily electron-doped with Tc~30 K. Only
electron pockets are observed with an almost isotropic superconducting gap of
~10.3 meV, while there is no hole Fermi surface near the zone center, which
indicates the inter-pocket hopping or Fermi surface nesting is not a necessary
ingredient for the unconventional superconductivity in iron-based
superconductors. Thus, the sign changed s pairing symmetry, a leading
candidate proposed for iron-based superconductors, becomes conceptually
irrelevant in describing the superconducting state here. A more conventional
s-wave pairing is a better description.Comment: 4 pages, 4 figures, published online in Nature Materials 201
The nature of localization in graphene under quantum Hall conditions
Particle localization is an essential ingredient in quantum Hall physics
[1,2]. In conventional high mobility two-dimensional electron systems Coulomb
interactions were shown to compete with disorder and to play a central role in
particle localization [3]. Here we address the nature of localization in
graphene where the carrier mobility, quantifying the disorder, is two to four
orders of magnitude smaller [4,5,6,7,8,9,10]. We image the electronic density
of states and the localized state spectrum of a graphene flake in the quantum
Hall regime with a scanning single electron transistor [11]. Our microscopic
approach provides direct insight into the nature of localization. Surprisingly,
despite strong disorder, our findings indicate that localization in graphene is
not dominated by single particle physics, but rather by a competition between
the underlying disorder potential and the repulsive Coulomb interaction
responsible for screening.Comment: 18 pages, including 5 figure
What limits supercurrents in high temperature superconductors? A microscopic model of cuprate grain boundaries
The interface properties of high-temperature cuprate superconductors have
been of interest for many years, and play an essential role in Josephson
junctions, superconducting cables, and microwave electronics. In particular,
the maximum critical current achievable in high-Tc wires and tapes is well
known to be limited by the presence of grain boundaries, regions of mismatch
between crystallites with misoriented crystalline axes. In studies of single,
artificially fabricated grain boundaries the striking observation has been made
that the critical current Jc of a grain boundary junction depends exponentially
on the misorientation angle. Until now microscopic understanding of this
apparently universal behavior has been lacking. We present here the results of
a microscopic evaluation based on a construction of fully 3D YBCO grain
boundaries by molecular dynamics. With these structures, we calculate an
effective tight-binding Hamiltonian for the d-wave superconductor with a grain
boundary. The critical current is then shown to follow an exponential
suppression with grain boundary angle. We identify the buildup of charge
inhomogeneities as the dominant mechanism for the suppression of the
supercurrent.Comment: 28 pages, 12 figure
Expressing one’s feelings and listening to others increases emotional intelligence: a pilot study of Asian medical students
<p>Background: There has been considerable interest in Emotional Intelligence (EI) in undergraduate medical education, with respect to student selection and admissions, health and well-being and academic performance. EI is a significant component of the physician-patient relationship. The emotional well-being of the physician is, therefore, a significant component in patient care. The aim is to examine the measurement of TEIQue-SF in Asian medical students and to explore how the practice of listening to the feelings of others and expressing one’s own feelings influences an individual’s EI, set in the context of the emotional well-being of a medical practitioner.</p>
<p>Methods: A group of 183 international undergraduate medical students attended a half-day workshop (WS) about mental-health and well-being. They completed a self-reported measure of EI on three occasions, pre- and post-workshop, and a 1-year follow-up.</p>
<p>Result: The reliability of TEIQue-SF was high and the reliabilities of its four factors were acceptable. There were strong correlations between the TEIQue-SF and personality traits. A paired t-test indicated significant positive changes after the WS for all students (n=181, p= .014), male students (n=78, p= .015) and non-Japanese students (n=112, p= .007), but a repeated measures analysis showed that one year post-workshop there were significant positive changes for all students (n=55, p= .034), female students (n=31, p= .007), especially Japanese female students (n=13, p= .023). Moreover, 80% of the students reported that they were more attentive listeners, and 60% agreed that they were more confident in dealing with emotional issues, both within themselves and in others, as a result of the workshop.</p>
<p>Conclusion: This study found the measurement of TEIQue-SF is appropriate and reliable to use for Asian medical students. The mental health workshop was helpful to develop medical students’ EI but showed different results for gender and nationality. The immediate impact on the emotional awareness of individuals was particularly significant for male students and the non-Japanese group. The impact over the long term was notable for the significant increase in EI for females and Japanese. Japanese female students were more conscious about emotionality. Emotion-driven communication exercises might strongly influence the development of students’ EI over a year.</p>
Vectorial dissipative solitons in vertical-cavity surface-emitting Lasers with delays
We show that the nonlinear polarization dynamics of a vertical-cavity
surface-emitting laser placed into an external cavity leads to the formation of
temporal vectorial dissipative solitons. These solitons arise as cycles in the
polarization orientation, leaving the total intensity constant. When the cavity
round-trip is much longer than their duration, several independent solitons as
well as bound states (molecules) may be hosted in the cavity. All these
solutions coexist together and with the background solution, i.e. the solution
with zero soliton. The theoretical proof of localization is given by the
analysis of the Floquet exponents. Finally, we reduce the dynamics to a single
delayed equation for the polarization orientation allowing interpreting the
vectorial solitons as polarization kinks.Comment: quasi final resubmission version, 12 pages, 9 figure
Smc5/6: a link between DNA repair and unidirectional replication?
Of the three structural maintenance of chromosome (SMC) complexes, two directly regulate chromosome dynamics. The third, Smc5/6, functions mainly in homologous recombination and in completing DNA replication. The literature suggests that Smc5/6 coordinates DNA repair, in part through post-translational modification of uncharacterized target proteins that can dictate their subcellular localization, and that Smc5/6 also functions to establish DNA-damage-dependent cohesion. A nucleolar-specific Smc5/6 function has been proposed because Smc5/6 yeast mutants display penetrant phenotypes of ribosomal DNA (rDNA) instability. rDNA repeats are replicated unidirectionally. Here, we propose that unidirectional replication, combined with global Smc5/6 functions, can explain the apparent rDNA specificity
Paintable Battery
If the components of a battery, including electrodes, separator, electrolyte and the current collectors can be designed as paints and applied sequentially to build a complete battery, on any arbitrary surface, it would have significant impact on the design, implementation and integration of energy storage devices. Here, we establish a paradigm change in battery assembly by fabricating rechargeable Li-ion batteries solely by multi-step spray painting of its components on a variety of materials such as metals, glass, glazed ceramics and flexible polymer substrates. We also demonstrate the possibility of interconnected modular spray painted battery units to be coupled to energy conversion devices such as solar cells, with possibilities of building standalone energy capture-storage hybrid devices in different configurations
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