The ECORS-Truc Vert’08 nearshore field experiment: Presentation of a three-dimensional morphologic system in a macro-tidal environment during consecutive extreme storm conditions

A large multi-institutional nearshore field experiment was conducted at Truc Vert, on the Atlantic coast of France in early 2008. Truc Vert’08 was designed to measure beach change on a long, sandy stretch of coast without engineering works with emphasis on large winter waves (offshore significant wave height up to 8 m), a three-dimensional morphology, and macro-tidal conditions. Nearshore wave transformation, circulation and bathymetric changes involve coupled processes at many spatial and temporal scales thus implying the need to improve our knowledge for the full spectrum of scales to achieve a comprehensive view of the natural system. This experiment is unique when compared with existing experiments because of the simultaneous investigation of processes at different scales, both spatially (from ripples to sand banks) and temporally (from single swash events to several spring-neap tidal cycles, including a major storm event). The purpose of this paper is to provide background information on the experiment by providing detailed presentation of the instrument layout and snapshots of preliminary results.Hydraulic EngineeringCivil Engineering and Geoscience

Domestication does not narrow MHC diversity in Sus scrofa

The Major Histocompatibility Complex (MHC) is a multigene family of outstanding polymorphism. MHC molecules bind antigenic peptides in the peptide-binding region (PBR) that consists of five binding pockets (P). In this study, we compared the genetic diversity of domestic pigs to that of the modern representatives of their wild ancestors, the wild boar, in two MHC loci, the oligomorphic DQA and the polymorphic DRB1. MHC nucleotide polymorphism was compared with the actual functional polymorphism in the PBR and the binding pockets P1, P4, P6, P7, and P9. The analysis of approximately 200 wild boars collected throughout Europe and 120 domestic pigs from four breeds (three pureblood, Pietrain, Leicoma, and Landrace, and one mixed Danbred) revealed that wild boars and domestic pigs share the same levels of nucleotide and amino acid polymorphism, allelic richness, and heterozygosity. Domestication did not appear to act as a bottleneck that would narrow MHC diversity. Although the pattern of polymorphism was uniform between the two loci, the magnitude of polymorphism was different. For both loci, most of the polymorphism was located in the PBR region and the presence of positive selection was supported by a statistically significant excess of nonsynonymous substitutions over synonymous substitutions in the PBR. P4 and P6 were the most polymorphic binding pockets. Functional polymorphism, i.e., the number and the distribution of pocket variants within and among populations, was significantly narrower than genetic polymorphism, indicative of a hierarchical action of selection pressures on MHC loci