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NRG1 functions downstream of EDS1 to regulate TIR-NLR-mediated plant immunity in Nicotiana benthamiana.
Effector-triggered immunity (ETI) in plants involves a large family of nucleotide-binding leucine-rich repeat (NLR) immune receptors, including Toll/IL-1 receptor-NLRs (TNLs) and coiled-coil NLRs (CNLs). Although various NLR immune receptors are known, a mechanistic understanding of NLR function in ETI remains unclear. The TNL Recognition of XopQ 1 (Roq1) recognizes the effectors XopQ and HopQ1 from Xanthomonas and Pseudomonas, respectively, which activates resistance to Xanthomonas euvesicatoria and Xanthomonas gardneri in an Enhanced Disease Susceptibility 1 (EDS1)-dependent way in Nicotiana benthamiana In this study, we found that the N. benthamiana N requirement gene 1 (NRG1), a CNL protein required for the tobacco TNL protein N-mediated resistance to tobacco mosaic virus, is also essential for immune signaling [including hypersensitive response (HR)] triggered by the TNLs Roq1 and Recognition of Peronospora parasitica 1 (RPP1), but not by the CNLs Bs2 and Rps2, suggesting that NRG1 may be a conserved key component in TNL signaling pathways. Besides EDS1, Roq1 and NRG1 are necessary for resistance to Xanthomonas and Pseudomonas in N. benthamiana NRG1 functions downstream of Roq1 and EDS1 and physically associates with EDS1 in mediating XopQ-Roq1-triggered immunity. Moreover, RNA sequencing analysis showed that XopQ-triggered gene-expression profile changes in N. benthamiana were almost entirely mediated by Roq1 and EDS1 and were largely regulated by NRG1. Overall, our study demonstrates that NRG1 is a key component that acts downstream of EDS1 to mediate various TNL signaling pathways, including Roq1 and RPP1-mediated HR, resistance to Xanthomonas and Pseudomonas, and XopQ-regulated transcriptional changes in N. benthamiana
SAVER: Surface Autonomous Vehicle for Emergency Rescue
The design, fabrication, and testing of an unmanned surface vehicle for the NASA Micro-G NExT SAVER challenge. This device features a radio direction finding phase array to autonomously navigate to an emergency distress beacon to deliver emergency supplies
Muscle recruitment patterns during the prone leg extension
BACKGROUND: The prone leg extension (PLE) is a clinical test used to evaluate the function of the lumbopelvis. It has been theorized that a normal and consistent pattern of muscle activation exists. Previous research has found two contradictory patterns of muscle activation during PLE in normal individuals. One study shows an almost simultaneous activation of the lower erector spinae and hamstring muscle group with a delayed activation of the gluteus maximus, while the second describes the order of activation being ipsilateral erector spinae (to the leg being extended), hamstrings, contralateral erector spinae and gluteus maximus. Due to the different conclusions from these two studies and the lack of quantified muscle onset times, expressed in absolute time this study attempted to quantify the muscle onset times (in milliseconds) during the prone leg extension, while noting if a consistent order of activation exists and whether a timing relationship also exists between the gluteus maximus and contralateral latissimus dorsi. METHODS: 10 asymptomatic males (Average height: 175.2 cm (SD 6.5), Average Weight 75.9 kg (SD 6.5), Average Age: 27.1(SD 1.28)) and 4 asymptomatic females (Average height 164.5 (SD 2.9), weight: 56.2 (SD 8.9), Average Age: 25 (SD 1)) performed the prone leg extension task while the myoelectric signal was recorded from the bilateral lower erector spinae, gluteus maximus and hamstring muscle groups. Activation onsets were determined from the rectified EMG signal relative to the onset of the hamstrings muscle group. RESULTS: No consistent recruitment patterns were detected for prone leg extension among the hamstring muscle group and the erector spinae. However, a consistent delay in the Gluteus Maximus firing of approximately 370 ms after the first muscle activated was found. Five out of 14 asymptomatic subjects showed a delay in gluteus maximus firing exceeding the average delay found in previous research of subjects considered to have a dysfunctional firing pattern. CONCLUSION: A consistent pattern of activation was not found. Variability was seen across subjects. These findings suggest the PLE is not sufficient for a diagnostic test due to the notable physiological variation. An overlap between normal and potentially abnormal activation patterns may exist
Two Stellar Components in the Halo of the Milky Way
The halo of the Milky Way provides unique elemental abundance and kinematic
information on the first objects to form in the Universe, which can be used to
tightly constrain models of galaxy formation and evolution. Although the halo
was once considered a single component, evidence for its dichotomy has slowly
emerged in recent years from inspection of small samples of halo objects. Here
we show that the halo is indeed clearly divisible into two broadly overlapping
structural components -- an inner and an outer halo -- that exhibit different
spatial density profiles, stellar orbits and stellar metallicities (abundances
of elements heavier than helium). The inner halo has a modest net prograde
rotation, whereas the outer halo exhibits a net retrograde rotation and a peak
metallicity one-third that of the inner halo. These properties indicate that
the individual halo components probably formed in fundamentally different ways,
through successive dissipational (inner) and dissipationless (outer) mergers
and tidal disruption of proto-Galactic clumps.Comment: Two stand-alone files in manuscript, concatenated together. The first
is for the main paper, the second for supplementary information. The version
is consistent with the version published in Natur
Supplier-induced demand for psychiatric admissions in Northern New England
The development of hospital service areas (HSAs) using small area analysis has been useful in examining variation in medical and surgical care; however, the techniques of small area analysis are underdeveloped in understanding psychiatric admission rates. We sought to develop these techniques in order to understand the relationship between psychiatric bed supply and admission rates in Northern New England. Our primary hypotheses were that there would be substantial variation in psychiatric admission across geographic settings and that bed availability would be positively correlated with admission rates, reflecting a supplier-induced demand phenomenon. Our secondary hypothesis was that the construction of psychiatric HSAs (PHSAs) would yield more meaningful results than the use of existing general medical hospital service areas
A Defined and Flexible Pocket Explains Aryl Substrate Promiscuity of the Cahuitamycin Starter Unit–Activating Enzyme CahJ
Cahuitamycins are biofilm inhibitors assembled by a convergent nonribosomal peptide synthetase pathway. Previous genetic analysis indicated that a discrete enzyme, CahJ, serves as a gatekeeper for cahuitamycin structural diversification. Here, the CahJ protein was probed structurally and functionally to guide the formation of new analogues by mutasynthetic studies. This analysis enabled the in vivo production of a new cahuitamycin congener through targeted precursor incorporation.Breaking the barrier: Biofilm formation is employed by pathogenic microbes to defend against antibiotic action. This study probes both structurally and functionally CahJ, a key biosynthetic adenylation enzyme involved in generation of the cahuitamycin biofilm inhibitors, and lays a foundation for the development of effective new analogues.Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/145379/1/cbic201800233_am.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/145379/2/cbic201800233.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/145379/3/cbic201800233-sup-0001-misc_information.pd
Central Powering of the Largest Lyman-alpha Nebula is Revealed by Polarized Radiation
High-redshift Lyman-alpha blobs are extended, luminous, but rare structures
that appear to be associated with the highest peaks in the matter density of
the Universe. Their energy output and morphology are similar to powerful radio
galaxies, but the source of the luminosity is unclear. Some blobs are
associated with ultraviolet or infrared bright galaxies, suggesting an extreme
starburst event or accretion onto a central black hole. Another possibility is
gas that is shock excited by supernovae. However some blobs are not associated
with galaxies, and may instead be heated by gas falling into a dark matter
halo. The polarization of the Ly-alpha emission can in principle distinguish
between these options, but a previous attempt to detect this signature returned
a null detection. Here we report on the detection of polarized Ly-alpha from
the blob LAB1. Although the central region shows no measurable polarization,
the polarized fraction (P) increases to ~20 per cent at a radius of 45 kpc,
forming an almost complete polarized ring. The detection of polarized radiation
is inconsistent with the in situ production of Ly-alpha photons, and we
conclude that they must have been produced in the galaxies hosted within the
nebula, and re-scattered by neutral hydrogen.Comment: Published in the August 18 issue of Nature. 1750 words, 3 figures,
and full Supplementary Information. Version has not undergone proofing.
Reduced and processed data products are available here:
http://obswww.unige.ch/people/matthew.hayes/LymanAlpha/LabPol
Quantum Holographic Encoding in a Two-dimensional Electron Gas
The advent of bottom-up atomic manipulation heralded a new horizon for
attainable information density, as it allowed a bit of information to be
represented by a single atom. The discrete spacing between atoms in condensed
matter has thus set a rigid limit on the maximum possible information density.
While modern technologies are still far from this scale, all theoretical
downscaling of devices terminates at this spatial limit. Here, however, we
break this barrier with electronic quantum encoding scaled to subatomic
densities. We use atomic manipulation to first construct open
nanostructures--"molecular holograms"--which in turn concentrate information
into a medium free of lattice constraints: the quantum states of a
two-dimensional degenerate Fermi gas of electrons. The information embedded in
the holograms is transcoded at even smaller length scales into an atomically
uniform area of a copper surface, where it is densely projected into both two
spatial degrees of freedom and a third holographic dimension mapped to energy.
In analogy to optical volume holography, this requires precise amplitude and
phase engineering of electron wavefunctions to assemble pages of information
volumetrically. This data is read out by mapping the energy-resolved electron
density of states with a scanning tunnelling microscope. As the projection and
readout are both extremely near-field, and because we use native quantum states
rather than an external beam, we are not limited by lensing or collimation and
can create electronically projected objects with features as small as ~0.3 nm.
These techniques reach unprecedented densities exceeding 20 bits/nm2 and place
tens of bits into a single fermionic state.Comment: Published online 25 January 2009 in Nature Nanotechnology; 12 page
manuscript (including 4 figures) + 2 page supplement (including 1 figure);
supplementary movie available at http://mota.stanford.ed
Fast Approximate Geodesics for Deep Generative Models
The length of the geodesic between two data points along a Riemannian
manifold, induced by a deep generative model, yields a principled measure of
similarity. Current approaches are limited to low-dimensional latent spaces,
due to the computational complexity of solving a non-convex optimisation
problem. We propose finding shortest paths in a finite graph of samples from
the aggregate approximate posterior, that can be solved exactly, at greatly
reduced runtime, and without a notable loss in quality. Our approach,
therefore, is hence applicable to high-dimensional problems, e.g., in the
visual domain. We validate our approach empirically on a series of experiments
using variational autoencoders applied to image data, including the Chair,
FashionMNIST, and human movement data sets.Comment: 28th International Conference on Artificial Neural Networks, 201
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