Symmetry Protected Topological phases and Generalized Cohomology

We discuss the classification of SPT phases in condensed matter systems. We review Kitaev's argument that SPT phases are classified by a generalized cohomology theory, valued in the spectrum of gapped physical systems. We propose a concrete description of that spectrum and of the corresponding cohomology theory. We compare our proposal to pre-existing constructions in the literature.Comment: 27 pages, 10 figures. v2: citation updat

Directed molecular screening for RecA ATPase inhibitors

The roles of bacterial RecA in the evolution and transmission of antibiotic resistance genes make it an attractive target for inhibition by small molecules. We report two complementary fluorescence-based ATPase assays that were used to screen for inhibitors of RecA. We elected to employ the ADP-linked variation of the assay, with a Z′ factor of 0.83 in 96-well microplates, to assess whether 18 select compounds could inhibit ATP hydrolyis by RecA. The compounds represented five sets of related inhibitor scaffolds, each of which had the potential to cross-inhibit RecA. Although nucleotide analogs, known inhibitors of GHL ATPases, and known protein kinase inhibitors were not active against RecA, we found that three suramin-like agents substantially inhibited RecA's ATPase activity

A novel methodology for recording wing beat frequencies of untethered male and female Aedes aegypti

Aedes aegypti is a vector of many significant arboviruses worldwide including dengue, Zika, chikungunya and yellow fever viruses. With vector control methodology pivoting towards rearing and releasing large numbers of insects for either population suppression or virus-blocking, economical remote (sentinel) surveillance methods for release tracking become increasingly necessary. Recent steps in this direction include advances in optical sensors that identify and classify insects based on their wing beat frequency (WBF). As these traps are being developed, there is a strong need to better understand the environmental and biological factors influencing mosquito WBFs. Here, we developed new untethered-subject methodology to detect changes in WBFs of male and female Ae. aegypti. This new methodology involves directing an ultrasonic transducer at a free-flying subject and measuring the Doppler shift of the reflected ultrasonic continuous wave signal. This system’s utility was assessed by determining its ability to confirm previous reports on the effect of temperature, body size and age on the WBFs generated from acoustic or optical-based experiments. The presented ultrasonic method successfully detected expected trends for each factor for both male and female Ae. aegypti without the need for subject manipulation and potential impediment of natural flight dynamics due to tethering. As a result, this ultrasonic methodology provides a new method for understanding the environmental and physiological determinants of male and female WBFs which can inform the design of remote mosquito surveillance systems

The N250 Brain Potential to Personally Familiar and Newly Learned Faces and Objects

Studies employing event-related potentials have shown that when participants are monitoring for a novel target face, the presentation of their own face elicits an enhanced negative brain potential in posterior channels approximately 250 ms after stimulus onset. Here, we investigate whether the own face N250 effect generalizes to other highly familiar objects, specifically, images of the participant’s own dog and own car. In our experiments, participants were asked to monitor for a pre-experimentally unfamiliar target face (Joe), a target dog (Experiment 1: Joe’s Dog) or a target car (Experiment 2: Joe’s Car). The target face and object stimuli were presented with non-target foils that included novel face and object stimuli, the participant’s own face, their own dog (Experiment 1), and their own car (Experiment 2). The consistent findings across the two experiments were the following: (1) the N250 potential differentiated the target faces and objects from the non-target face and object foils and (2) despite being non-targets, the own face and own objects produced an N250 response that was equal in magnitude to the target faces and objects by the end of the experiment. Thus, as indicated by its response to personally familiar and recently familiarized faces and objects, the N250 component is a sensitive index of individuated representations in visual memory