Climatic controls on diatom succession at Elk Lake, Minnesota [abstract]

EXTRACT (SEE PDF FOR FULL ABSTRACT): Sediment traps placed in the profundal region of Elk Lake, north central Minnesota during the 1979 spring and 1983-84 fall and spring seasons monitored seasonal diatom production for two climatically distinctive periods

Paleoclimates in Southwestern Tasmania during the Last 13,000 Years

Plant-sociological and climatic classification of the Australian Nothofagus cunninghamii rain forest provides the basis for a new, semiquantitative approach to interpretations of late-Quaternary paleoclimates from four pollen sequences in southwestern Tasmania. Varying proportions of rain-forest pollen types in the records were related to different modern rain-forest alliances and their specifc climatic regimes, such as Eastern Rain Forest, Leatherwood Rain Forest, and sclerophyllous, Subalpine Rain Forest. According to this interpretation, early Holocene climates were characterized by 1,600 mm annual precipitation and 10°C annual temperature, conditions substantially warmer and drier than previously thought. Maximum precipitation levels of 2,500 mm annually were not reached until 8,000 years B.P. A short-term cooling episode between 6,000 and 5,000 years B.P. led to the establishment of modern rain-forest distribution in western Tasmania, characterized either by a precipitation gradient steeper than before, or by greater climatic variability. To interpret paleoclimates from before 12,000 years B. P., when non-arboreal environments dominated in western Tasmanian bollen records, various modern treeless environments were studied in search for analogs. Contrary to earlier interpretations, late-glacial environments were not alpine tundra with a treeline at modern sea level, but steppe, with marshes or shallow lakes instead of the modern lakes. Climate was characterized by 50% less precipitation than today, resulting in substantial summer droughts. To explain such drastic precipitation decrease, the westerlies that dominate Tasmanian climate today must have been shifted polewards. This suggestion is supported by climate models that take Milankovitch-type insolation differences into account as well as sea-surface temperatures. Paleolimnological information based on diatom analyses support the general paleoclimatic reassessment

A Land-Use and Water-Quality History of White Rock Lake Reservoir, Dallas, Texas, Based on Paleolimnological Analyses

White Rock Lake reservoir in Dallas, Texas contains a 150-cm sediment record of silty clay that documents land-use changes since its construction in 1912. Pollen analysis corroborates historical evidence that between 1912 and 1950 the watershed was primarily agricultural. Land disturbance by plowing coupled with strong and variable spring precipitation caused large amounts of sediment to enter the lake during this period. Diatoms were not preserved at this time probably because of low productivity compared to diatom dissolution by warm, alkaline water prior to burial in the sediments. After 1956, the watershed became progressively urbanized. Erosion decreased, land stabilized, and pollen of riparian trees increased as the lake water became somewhat less turbid. By 1986 the sediment record indicates that diatom productivity had increased beyond rates of diatom destruction. Neither increased nutrients nor reduced pesticides can account for increased diatom productivity, but grain size studies imply that before 1986 diatoms were light limited by high levels of turbidity. This study documents how reservoirs may relate to land-use practices and how watershed management could extend reservoir life and improve water quality

phenosim - A software to simulate phenotypes for testing in genome-wide association studies

<p>Abstract</p> <p>Background</p> <p>There is a great interest in understanding the genetic architecture of complex traits in natural populations. Genome-wide association studies (GWAS) are becoming routine in human, animal and plant genetics to understand the connection between naturally occurring genotypic and phenotypic variation. Coalescent simulations are commonly used in population genetics to simulate genotypes under different parameters and demographic models.</p> <p>Results</p> <p>Here, we present <monospace>phenosim</monospace>, a software to add a phenotype to genotypes generated in time-efficient coalescent simulations. Both qualitative and quantitative phenotypes can be generated and it is possible to partition phenotypic variation between additive effects and epistatic interactions between causal variants. The output formats of <monospace>phenosim</monospace> are directly usable as input for different GWAS tools. The applicability of <monospace>phenosim</monospace> is shown by simulating a genome-wide association study in <it>Arabidopsis thaliana</it>.</p> <p>Conclusions</p> <p>By using the coalescent approach to generate genotypes and <monospace>phenosim</monospace> to add phenotypes, the data sets can be used to assess the influence of various factors such as demography, genetic architecture or selection on the statistical power of association methods to detect causal genetic variants under a wide variety of population genetic scenarios. <monospace>phenosim</monospace> is freely available from the authors' website <url>http://evoplant.uni-hohenheim.de</url></p

Incisional hernia following colorectal cancer surgery according to suture technique: Hughes Abdominal Repair Randomized Trial (HART).

BACKGROUND: Incisional hernias cause morbidity and may require further surgery. HART (Hughes Abdominal Repair Trial) assessed the effect of an alternative suture method on the incidence of incisional hernia following colorectal cancer surgery. METHODS: A pragmatic multicentre single-blind RCT allocated patients undergoing midline incision for colorectal cancer to either Hughes closure (double far-near-near-far sutures of 1 nylon suture at 2-cm intervals along the fascia combined with conventional mass closure) or the surgeon's standard closure. The primary outcome was the incidence of incisional hernia at 1 year assessed by clinical examination. An intention-to-treat analysis was performed. RESULTS: Between August 2014 and February 2018, 802 patients were randomized to either Hughes closure (401) or the standard mass closure group (401). At 1 year after surgery, 672 patients (83.7 per cent) were included in the primary outcome analysis; 50 of 339 patients (14.8 per cent) in the Hughes group and 57 of 333 (17.1 per cent) in the standard closure group had incisional hernia (OR 0.84, 95 per cent c.i. 0.55 to 1.27; P = 0.402). At 2 years, 78 patients (28.7 per cent) in the Hughes repair group and 84 (31.8 per cent) in the standard closure group had incisional hernia (OR 0.86, 0.59 to 1.25; P = 0.429). Adverse events were similar in the two groups, apart from the rate of surgical-site infection, which was higher in the Hughes group (13.2 versus 7.7 per cent; OR 1.82, 1.14 to 2.91; P = 0.011). CONCLUSION: The incidence of incisional hernia after colorectal cancer surgery is high. There was no statistical difference in incidence between Hughes closure and mass closure at 1 or 2 years. REGISTRATION NUMBER: ISRCTN25616490 (http://www.controlled-trials.com)