Focusing of Active Particles in a Converging Flow

We consider active particles swimming in a convergent fluid flow in a trapezoid nozzle with no-slip walls. We use mathematical modeling to analyze trajectories of these particles inside the nozzle. By extensive Monte Carlo simulations, we show that trajectories are strongly affected by the background fluid flow and geometry of the nozzle leading to wall accumulation and upstream motion (rheotaxis). In particular, we describe the non-trivial focusing of active rods depending on physical and geometrical parameters. It is also established that the convergent component of the background flow leads to stability of both downstream and upstream swimming at the centerline. The stability of downstream swimming enhances focusing, and the stability of upstream swimming enables rheotaxis in the bulk.Comment: 21 pages, 13 figure

Flagella bending affects macroscopic properties of bacterial suspensions

To survive in harsh conditions, motile bacteria swim in complex environment and respond to the surrounding flow. Here we develop a PDE model describing how the flagella bending affects macroscopic properties of bacterial suspensions. First, we show how the flagella bending contributes to the decrease of the effective viscosity observed in dilute suspension. Our results do not impose tumbling (random re-orientation) as it was done previously to explain the viscosity reduction. Second, we demonstrate a possibility of bacterium escape from the wall entrapment due to the self-induced buckling of flagella. Our results shed light on the role of flexible bacterial flagella in interactions of bacteria with shear flow and walls or obstacles