A symmoriiform from the Late Devonian of Morocco demonstrates a derived jaw function in ancient chondrichthyans

This work is licensed under a Creative Commons Attribution 4.0 International License.The Palaeozoic record of chondrichthyans (sharks, rays, chimaeras, extinct relatives) and thus our knowledge of their anatomy and functional morphology is poor because of their predominantly cartilaginous skeletons. Here, we report a previously undescribed symmoriiform shark, Ferromirum oukherbouchi, from the Late Devonian of the Anti-Atlas. Computed tomography scanning reveals the undeformed shape of the jaws and hyoid arch, which are of a kind often used to represent primitive conditions for jawed vertebrates. Of critical importance, these closely fitting cartilages preclude the repeatedly hypothesized presence of a complete gill between mandibular and hyoid arches. We show that the jaw articulation is specialized and drives mandibular rotation outward when the mouth opens, and inward upon closure. The resultant eversion and inversion of the lower dentition presents a greater number of teeth to prey through the bite-cycle. This suggests an increased functional and ecomorphological disparity among chondrichthyans preceding and surviving the end-Devonian extinctions.Swiss National Science Foundation (project number 200020_184894)NOW Vidi grant no. 864.14.00

Back to the future? Conservative grassland management can preserve soil health in the changing landscapes of Uruguay

The “soils of the Anthropocene” are predominately agricultural. To understand them, we analyzed agri- and silvicultural intensification of Uruguayan grasslands (GLs) in a country-wide survey on fertility proxies, pH and trace metals in topsoils originating from different land uses across the whole country. Thus, our results reflect interactions of both the natural diversity of Uruguayan soil formation and the impacts of land use change. We observed a loss of nutrients, trace metals and organic matter from GLs, croplands and timber plantations (TPs). As an example, the cation exchange capacity was 160 % higher in native forests (NFs) compared to GLs and lowest in TPs, reaching only half of the cation exchange capacity (CEC) in GLs. Acidification of topsoils continues as three-fourths of all samples are “extremely acidic” and “very strongly acidic”. Topsoils of riverine forests accumulate more trace metals compared to the other uses. We assume an accumulation in the topsoils of riverine forests, where high levels of nutrients, trace metals and organic carbon (OC) are found. The translocation of nutrients and organic matter across the landscape to the erosion base depends on local land use trajectories. Increasing soil acidification is driving a positive feedback loop, and land use intensification has lead to degradation of local black soils within a few decades. Our data raise questions about the resilience and carrying capacity of Uruguayan soils with regard to currently implemented highly productive management forms, including the use of TPs for carbon sequestration, and supports more conservative forms of extensive management on the GL biome.</p

Occult Interpositional Rotator Cuff - an Extremely Rare Case of Traumatic Rotator Cuff Tear

Traumatic interposition of a rotator cuff tendon in the glenohumeral joint without recognizable glenohumeral dislocation is an unusual complication after shoulder trauma. Here we report the clinical and imaging presentations of a 17-year-old man with trapped rotator cuff tendons in the glenohumeral joint after a bicycle accident. The possible trauma mechanism is also discussed

Methods Of Gene Expression Monitoring

The invention provides methods of monitoring expression of a plurality of genes in a cell or small population of cells. Preferred methods entail contacting an array of probes with a population of nucleic acids derived from a population of fewer than 1000 cells then determining the relative hybridization of the probes to the population of nucleic acid as a measure of the relative representation of genes from the cells. The invention further provides methods of classifying cells. These preferred methods entail determining an expression profile of each of a plurality of cells then classifying the cells in clusters determined by similarity of expression profile. The invention further provides methods of monitoring differentiation of a cell lineage. These preferred methods entail determining an expression profile of each of a plurality of cells at different differentiation stages within the lineage. These cells can then be classified into clusters determined by similarity of expression profile. The clusters can then be ordered by similarity of expression profile. A time course of expression levels for each of the plurality of genes at different stages of differentiation in the cell lineage can then be determined

Public space in an age of austerity

Through an overview of the decade 2008 to 2017, and looking comparatively across four northern European cities, this paper refects on the changing nature of public space during these austerity years and on the processes of shaping public spaces. The paper draws from the experiences of London, Copenhagen, Malmo and Oslo to explore processes of the design, development, use and management of public spaces during this period. The evidence suggests that we have witnessed a period of signifcant innovation, side by side with major challenges to the collective approach to public spaces. This has led to distinct forms of public spaces that for good or ill have multiplied as a result of the trends discussed in the paper, spaces of; expectation; the private/public sphere; spectacle; respite; infrastructure; diversion; income generation; security; the ephemeral city; community control; occupation; disadvantage; and decline. Episodes of changing practice are set out in the paper and cumulatively reveal distinct and signifcant changes during the austerity era, although not necessarily in the manner that might have been expected. Instead, in these four cities, the impact of austerity seems to have been eclipsed by other evolving and competing public policy goals, and by the evolving range of public space type

Endometriosis and Headache

Headache and endometriosis show some similarities in their clinical and epidemiological features that are probably due to the influence of female sexual hormones on both disorders. Epidemiological studies indicate that they are comorbid disorders. However, the nature of the comorbidity is not known with certainty, but a likely explanation may be common susceptibility genes. Another possibility is that, because they both are related to pain, increased pain sensitivity induced by one of the disorders may lead to a higher likelihood of developing the other, possibly mediated by nitrogen oxide or prostaglandins. A common link to the widespread use of estroprogestins may seem less probable. For physicians dealing with women with either of these disorders, awareness of the comorbidity may be helpful in the treatment of the patient

Resilience trinity: Safeguarding ecosystem functioning and services across three different time horizons and decision contexts

Ensuring ecosystem resilience is an intuitive approach to safeguard the functioning of ecosystems and hence the future provisioning of ecosystem services (ES). However, resilience is a multi‐faceted concept that is difficult to operationalize. Focusing on resilience mechanisms, such as diversity, network architectures or adaptive capacity, has recently been suggested as means to operationalize resilience. Still, the focus on mechanisms is not specific enough. We suggest a conceptual framework, resilience trinity, to facilitate management based on resilience mechanisms in three distinctive decision contexts and time‐horizons: 1) reactive, when there is an imminent threat to ES resilience and a high pressure to act, 2) adjustive, when the threat is known in general but there is still time to adapt management and 3) provident, when time horizons are very long and the nature of the threats is uncertain, leading to a low willingness to act. Resilience has different interpretations and implications at these different time horizons, which also prevail in different disciplines. Social ecology, ecology and engineering are often implicitly focussing on provident, adjustive or reactive resilience, respectively, but these different notions of resilience and their corresponding social, ecological and economic tradeoffs need to be reconciled. Otherwise, we keep risking unintended consequences of reactive actions, or shying away from provident action because of uncertainties that cannot be reduced. The suggested trinity of time horizons and their decision contexts could help ensuring that longer‐term management actions are not missed while urgent threats to ES are given priority

Computational prediction of neural progenitor cell fates

Understanding how stem and progenitor cells choose between alternative cell fates is a major challenge in developmental biology. Efforts to tackle this problem have been hampered by the scarcity of markers that can be used to predict cell division outcomes. Here we present a computational method, based on algorithmic information theory, to analyze dynamic features of living cells over time. Using this method, we asked whether rat retinal progenitor cells (RPCs) display characteristic phenotypes before undergoing mitosis that could foretell their fate. We predicted whether RPCs will undergo a self-renewing or terminal division with 99% accuracy, or whether they will produce two photoreceptors or another combination of offspring with 87% accuracy. Our implementation can segment, track and generate predictions for 40 cells simultaneously on a standard computer at 5 min per frame. This method could be used to isolate cell populations with specific developmental potential, enabling previously impossible investigations.The computational aspects of this work were supported by the Center for Subsurface Sensing and Imaging Systems (NSF Grant EEC-9986821), by the Rensselaer Polytechnic Institute and by the University of Wisconsin-Milwaukee. This work was supported by grants from the Canadian Institutes of Health Research and the Foundation Fighting Blindness – Canada (to M.C). M.C. is a CIHR New Investigator and a W.K. Stell Scholar of the Foundation Fighting Blindness – Canada

A symmoriiform chondrichthyan braincase and the origin of chimaeroid fishes

Chimaeroid fishes (Holocephali) are one of the four principal divisions of modern gnathostomes (jawed vertebrates). Despite only 47 described living species1, chimaeroids are the focus of resurgent interest as potential archives of genomic data2 and for the unique perspective they provide on chondrichthyan and gnathostome ancestral conditions. Chimaeroids are also noteworthy for their highly derived body plan1,3,4. However, like other living groups with distinctive anatomies5, fossils have been of limited use in unravelling their evolutionary origin, as the earliest recognized examples already exhibit many of the specializations present in modern forms6,7. Here we report the results of a computed tomography analysis of Dwykaselachus, an enigmatic chondrichthyan braincase from the ~280 million year old Karoo sediments of South Africa8. Externally, the braincase is that of a symmoriid shark9,10,11,12,13and is by far the most complete uncrushed example yet discovered. Internally, the morphology exhibits otherwise characteristically chimaeroid specializations, including the otic labyrinth arrangement and the brain space configuration relative to exceptionally large orbits. These results have important implications for our view of modern chondrichthyan origins, add robust structure to the phylogeny of early crown group gnathostomes, reveal preconditions that suggest an initial morpho-functional basis for the derived chimaeroid cranium, and shed new light on the chondrichthyan response to the extinction at the end of the Devonian period

Accurate Expression Profiling of Very Small Cell Populations

BACKGROUND: Expression profiling, the measurement of all transcripts of a cell or tissue type, is currently the most comprehensive method to describe their physiological states. Given that accurate profiling methods currently available require RNA amounts found in thousands to millions of cells, many fields of biology working with specialized cell types cannot use these techniques because available cell numbers are limited. Currently available alternative methods for expression profiling from nanograms of RNA or from very small cell populations lack a broad validation of results to provide accurate information about the measured transcripts. METHODS AND FINDINGS: We provide evidence that currently available methods for expression profiling of very small cell populations are prone to technical noise and therefore cannot be used efficiently as discovery tools. Furthermore, we present Pico Profiling, a new expression profiling method from as few as ten cells, and we show that this approach is as informative as standard techniques from thousands to millions of cells. The central component of Pico Profiling is Whole Transcriptome Amplification (WTA), which generates expression profiles that are highly comparable to those produced by others, at different times, by standard protocols or by Real-time PCR. We provide a complete workflow from RNA isolation to analysis of expression profiles. CONCLUSIONS: Pico Profiling, as presented here, allows generating an accurate expression profile from cell populations as small as ten cells