Expression of fatty acid synthesis genes and fatty acid accumulation in haematococcus pluvialis under different stressors

<p>Abstract</p> <p>Background</p> <p>Biofuel has been the focus of intensive global research over the past few years. The development of 4^thgeneration biofuel production (algae-to-biofuels) based on metabolic engineering of algae is still in its infancy, one of the main barriers is our lacking of understanding of microalgal growth, metabolism and biofuel production. Although fatty acid (FA) biosynthesis pathway genes have been all cloned and biosynthesis pathway was built up in some higher plants, the molecular mechanism for its regulation in microalgae is far away from elucidation.</p> <p>Results</p> <p>We cloned main key genes for FA biosynthesis in <it>Haematococcus pluvialis</it>, a green microalga as a potential biodiesel feedstock, and investigated the correlations between their expression alternation and FA composition and content detected by GC-MS under different stress treatments, such as nitrogen depletion, salinity, high or low temperature. Our results showed that high temperature, high salinity, and nitrogen depletion treatments played significant roles in promoting microalgal FA synthesis, while FA qualities were not changed much. Correlation analysis showed that acyl carrier protein (ACP), 3-ketoacyl-ACP-synthase (KAS), and acyl-ACP thioesterase (FATA) gene expression had significant correlations with monounsaturated FA (MUFA) synthesis and polyunsaturated FA (PUFA) synthesis.</p> <p>Conclusions</p> <p>We proposed that ACP, KAS, and FATA in <it>H. pluvialis </it>may play an important role in FA synthesis and may be rate limiting genes, which probably could be modified for the further study of metabolic engineering to improve microalgal biofuel quality and production.</p

Transgenerational Epigenetic Inheritance Under Environmental Stress by Genome-Wide DNA Methylation Profiling in Cyanobacterium

Epigenetic modifications such as DNA methylation are well known as connected with many important biological processes. Rapid accumulating evidence shows environmental stress can generate particular defense epigenetic changes across generations in eukaryotes. This transgenerational epigenetic inheritance in animals and plants has gained interest over the last years. Cyanobacteria play very crucial role in the earth, and as the primary producer they can adapt to nearly all diverse environments. However, few knowledge about the genome wide epigenetic information such as methylome information in cyanobacteria, especially under any environment stress, was reported so far. In this study we profiled the genome-wide cytosine methylation from a model cyanobacterium Synechocystis sp. PCC 6803, and explored the possibility of transgenerational epigenetic process in this ancient single-celled prokaryote by comparing the DNA methylomes among normal nitrogen medium cultivation, nitrogen starvation for 72 h and nitrogen recovery for about 12 generations. Our results shows that DNA methylation patterns in nitrogen starvation and nitrogen recovery are much more similar with each other, significantly different from that of the normal nitrogen. This study reveals the difference in global DNA methylation pattern of cyanobacteria between normal and nutrient stress conditions and reports the evidence of transgenerational epigenetic process in cyanobacteria. The results of this study may contribute to a better understanding of epigenetic regulation in prokaryotic adaptation to and survive in the ever changing environment

Terahertz nonlinear hall rectifiers based on spin-polarized topological electronic states in 1T-CoTe2

The zero-magnetic-field nonlinear Hall effect (NLHE) refers to the second-order transverse current induced by an applied alternating electric field; it indicates the topological properties of inversion-symmetry-breaking crystals. Despite several studies on the NLHE induced by the Berry-curvature dipole in Weyl semimetals, the direct current conversion by rectification is limited to very low driving frequencies and cryogenic temperatures. The nonlinear photoresponse generated by the NLHE at room temperature can be useful for numerous applications in communication, sensing, and photodetection across a high bandwidth. In this study, observations of the second-order NLHE in type-II Dirac semimetal CoTe2 under time-reversal symmetry are reported. This is determined by the disorder-induced extrinsic contribution on the broken-inversion-symmetry surface and room-temperature terahertz rectification without the need for semiconductor junctions or bias voltage. It is shown that remarkable photoresponsivity over 0.1 A W−1, a response time of approximately 710 ns, and a mean noise equivalent power of 1 pW Hz−1/2 can be achieved at room temperature. The results open a new pathway for low-energy photon harvesting via nonlinear rectification induced by the NLHE in strongly spin–orbit-coupled and inversion-symmetry-breaking systems, promising a considerable impact in the field of infrared/terahertz photonicsPID2019–109525RB-I00, CEX2018-000805-M, EU’s H2020 NFFA-Europe (n. 654360), and NFFA-Europe-Pilot (10100741

Cassava genome from a wild ancestor to cultivated varieties

Cassava is a major tropical food crop in the Euphorbiaceae family that has high carbohydrate production potential and adaptability to diverse environments. Here we present the draft genome sequences of a wild ancestor and a domesticated variety of cassava and comparative analyses with a partial inbred line. We identify 1,584 and 1,678 gene models specific to the wild and domesticated varieties, respectively, and discover high heterozygosity and millions of single-nucleotide variations. Our analyses reveal that genes involved in photosynthesis, starch accumulation and abiotic stresses have been positively selected, whereas those involved in cell wall biosynthesis and secondary metabolism, including cyanogenic glucoside formation, have been negatively selected in the cultivated varieties, reflecting the result of natural selection and domestication. Differences in microRNA genes and retrotransposon regulation could partly explain an increased carbon flux towards starch accumulation and reduced cyanogenic glucoside accumulation in domesticated cassava. These results may contribute to genetic improvement of cassava through better understanding of its biology

Efficient Catalytic Production of Biodiesel with Acid-Base Bifunctional Rod-Like Ca-B Oxides by the Sol-Gel Approach

The search for acid-base bifunctional catalysts has become a hot topic in the preparation of biofuels from renewable resources. In the present work, a series of novel acid-base bifunctional metal-boron catalysts were successfully prepared by a sol-gel method and characterized by XRD, IR, SEM, TEM, TGA, BET, and TPD. Among those bifunctional solid materials, the Ca-B(700) catalyst had the highest density of both acid and base sites and showed excellent catalytic performance in the production of biodiesel from nonedible oils with high acid value. Under the optimal reaction conditions of 20/1 methanol/oil mole ratio and 4 wt % catalyst dosage at 105 &deg;C for 2 h, a high biodiesel yield of 96.0% could be obtained from Jatropha curcas oil in one-pot. In addition, Ca-B(700) was also applicable to producing biodiesel from Firmiana platanifolia L.f. oil in a relatively low acid value, with an almost quantitative yield (98.5%) at 65 &deg;C after 2 h. The Ca-B(700) catalyst had good stability and reusability, which is a promising acid-base bifunctional catalytic material for the preparation of biodiesel

Experimental simulation of dissolution law and porosity evolution of carbonate rock

Experiments of acetic acid (initial 0.2%) with porous dolostone, fractured-porous-vuggy dolostone, porous limestone and fractured limestone were done in a continuous flow diagenesis simulation system to find out the controlling factor of dissolution and dissolution effect. The results show that the dissolution quantity of carbonate rock inversely proportional to temperature and directly proportional to pressure, and the temperature effect is greater than the pressure effect. Therefore, relatively shallow burial and lower temperature environment is more beneficial to the formation of large scale carbonate dissolution pores. Quantitative comparison of porosity volume and permeability variation, and evolution of pores inside the rock before and after the experiment show that pore structure has apparent control over the carbonate dissolution and pore evolution. After dissolution, porous dolomite with homogeneous pore distribution saw rise in pore volume (matrix pore volume) and permeability, and remained as pore type in terms of reservoir space; porous limestone, with significant heterogeneity in original pores and texture, saw significant increase in pore volume and permeability, but the increased pores were fracture type, so its reservoir space turned into fracture-pore type; dissolution increased the permeability of fracture-pore dolomite and fracture limestone remarkably by 2-3 orders of magnitude; and the pores increased were mainly along dissolution fractures, turning the reservoir space into fracture-cave type. Key words: carbonate rock, dissolution quantity, dissolution law, pore evolution, temperature effect, pressure effec

Evaluating the Sustainable Traffic Flow Operational Features of U-turn Design with Advance Left Turn

Median U-turn intersection treatment (MUIT) has been considered as an alternative measure to reduce congestion and traffic conflict at intersection areas, but the required spacing between the U-turn opening and the intersection limits its applicability. In this paper, a U-turn design with Advance Left Turn (UALT) is proposed with the aim of addressing the disadvantages of insufficient intersection spacing and difficulty in the continuous vehicle lane change. UALT provides a dedicated lane to advance the turning vehicle out of the intersection and directly to the U-turn opening without interacting with through traffic. The effectiveness and traffic volume applicability of UALT was demonstrated through field data investigation, simulation and analysis with VISSIM software. The proposed design was evaluated in terms of three parameters: delay, queue length and the number of stops. The results show that when the traffic volume range of the main road is (1900, 2200) pcu/h and the traffic volume of the secondary road is more than 900 pcu/h, the optimization effect of UALT on both conventional intersections and MUIT is very significant. Taking a signal-controlled intersection in Zhengzhou City, China, as an example to build a simulation model, compared with the conventional intersection and MUIT, the delay drop is reduced by 73.48% and 41.48%, the queue length is reduced by 84.85% and 41.66%, and the operation efficiency is significantly improved

Scale and distribution of marine carbonate burial dissolution pores

It is gradually accepted that porosity can be created in burial settings via dissolution by organic acid; TSR derived or hydrothermal fluids. The role of deep-buried carbonate reservoirs is becoming more and more important since the degree and difficulty in petroleum exploration of shallow strata are increasing. A profound understanding of the development scale and prediction of the deep-buried carbonate reservoirs is economically crucial. In addition to the formation mechanism, scale and distribution of burial dissolution pores in burial settings are focused on in recent studies. This paper is based on case studies of deep-buried (>4500 m) carbonate reservoirs from the Tarim Basin and Sichuan Basin. Case studies mentioned includes dissolution simulation experiments proposes that an open system is of crucial importance in the development of large-scale burial dissolution pores, the distribution pattern of which is controlled by lithology, pre-existing porosity, and pore throat structures. These findings provided the basis for evaluation and prediction of deep-buried carbonate reservoirs