207 research outputs found

    Swimming Efficiency of Bacterium Escherichia Coli

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    We use in vivo measurements of swimming bacteria in an optical trap to determine fundamental properties of bacterial propulsion. In particular, we determine the propulsion matrix, which relates the angular velocity of the flagellum to the torques and forces propelling the bacterium. From the propulsion matrix dynamical properties such as forces, torques, swimming speed and power can be obtained from measurements of the angular velocity of the motor. We find significant heterogeneities among different individuals even though all bacteria started from a single colony. The propulsive efficiency, defined as the ratio of the propulsive power output to the rotary power input provided by the motors, is found to be 0.2%.Comment: 6 page

    Phase structure of a spherical surface model on fixed connectivity meshes

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    An elastic surface model is investigated by using the canonical Monte Carlo simulation technique on triangulated spherical meshes. The model undergoes a first-order collapsing transition and a continuous surface fluctuation transition. The shape of surfaces is maintained by a one-dimensional bending energy, which is defined on the mesh, and no two-dimensional bending energy is included in the Hamiltonian.Comment: 13 pages with 9 figure

    Formation of membrane networks in vitro by kinesin-driven microtubule movement.

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    Shape transformation transitions of a tethered surface model

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    A surface model of Nambu and Goto is studied statistical mechanically by using the canonical Monte Carlo simulation technique on a spherical meshwork. The model is defined by the area energy term and a one-dimensional bending energy term in the Hamiltonian. We find that the model has a large variety of phases; the spherical phase, the planar phase, the long linear phase, the short linear phase, the wormlike phase, and the collapsed phase. Almost all two neighboring phases are separated by discontinuous transitions. It is also remarkable that no surface fluctuation can be seen in the surfaces both in the spherical phase and in the planar phase.Comment: 7 pages with 8 figure

    Landslide occurrence and geology of the Triassic Nariwa Group, Southwest Japan

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    Geological and topographical study of landslides in the Triassic Nariwa Group has been carried out. Nariwa Group is mostly composed of non-marine deposites and is characterized by cycle of fining upward successions. Landslides abundantly occur in the non-marine successions. Slip surface occure in coaly mudstones that have conspicuously less strength than sandstones. Creeps immediately below slip surfaces contribute to the occurrence of landslides in the Nariwa Group

    Monte Carlo studies of a Finsler geometric surface model

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    This paper presents a new type of surface models constructed on the basis of Finsler geometry. A Finsler metric is defined on the surface by using an underlying vector field, which is an in-plane tilt order. According to the orientation of the vector field, the Finsler length becomes dependent on both position and direction on the surface, and for this reason the parameters such as the surface tension and bending rigidity become anisotropic. To confirm that the model is well-defined, we perform Monte Carlo simulations under several isotropic conditions such as those given by random vector fields. The results are comparable to those of previous simulations of the conventional model. It is also found that a tubular phase appears when the vector field is constant. Moreover, we find that the tilts form the Kosterlitz-Thouless and low temperature configurations, which correspond to two different anisotropic phases such as disk and tubular, in the model in which the tilt variable is assumed to be a dynamical variable. This confirms that the model in this paper may be used as an anisotropic model for membranes.Comment: 25 pages, 13 figure

    Shape Changes of Self-Assembled Actin Bilayer Composite Membranes

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    We report the self-assembly of thin actin shells beneath the membranes of giant vesicles. Ion-carrier mediated influx of Mg2+ induces actin polymerization in the initially spherical vesicles. Buckling of the vesicles and the formation of blisters after thermally induced bilayer expansion is demonstrated. Bilayer flickering is dominated by tension generated by its coupling to the actin cortex. Quantitative flicker analysis suggests the bilayer and the actin cortex are separated by 0.4 \mum to 0.5 \mum due to undulation forces.Comment: pdf-file, has been accepted by PR

    Morphology of axisymmetric vesicles with encapsulated filaments and impurities

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    The shape deformation of a three-dimensional axisymmetric vesicle with encapsulated filaments or impurities is analyzed by integrating a dissipation dynamics. This method can incorporate systematically the constraint of a fixed surface area and/or a fixed volume. The filament encapsulated in a vesicle is assumed to take a form of a rod or a ring so as to imitate cytoskeletons. In both cases, results of the shape transition of the vesicle are summarized in phase diagrams in the phase space of the vesicular volume and a rod length or a ring radius. We also study the dynamics of a vesicle with impurities coupled to the membrane curvature. The phase separation and the associated shape deformation in the early stage of the dynamical evolution can well be explained by the linear stability analysis. Long runs of simulation demonstrate the nonlinear coarsening of the wavy deformation of the vesicle in the late stage.Comment: 9 pages, 9 figure

    Distributions and ages of the Paleogene deposits in the Kibi Plateau Area, and Paleogene paleogeography

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    The "Kibi Plateau" forms a unique geomorphic province with the gently-sloping and stable continental feature. Gravel deposites called the "Mountain Gravels", are distributed sporadically in the Kibi Plateau, and have been considered Pliocene deposits. However, recent fission-track ages of the tuff beds intercalated in the deposits have indicated that the ago of deposits are Paleogen in the age. So far, fission-track ages (using zircon) of 61 to 65, 55, 37, 34 to 35 and 27 Ma are obtained. Remaining the belt-like distributions of the Paleogene gravelly valley-full deposits suggest that the Kibe Plateau has been keeping as a stable block, and repeated periods of incision followed by sedimentation of valley-fill deposits are occurred in the area during Paleogene period
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