A comparison of trends in population size and life history features of Atlantic salmon (Salmo salar) and anadromous and non-anadromous Brown trout (Salmo trutta) in a single catchment over 116 years

We use a long time series of catch abundance from a recreational fishery over 116 years to look for population trends in Atlantic salmon, and anadromous (sea trout) and non-anadromous (brown) trout for a single catchment, Loch Lomond, west central Scotland. Year strongly predicted variation in catches but catch effort did not meaningfully increase explained variation. Salmon showed periods of increasing and decreasing trends, for sea trout and brown trout there was an overall declining trend. Since 1952, Lomond salmon population trends differed from both wider Scotland and southern Europe, indicating that the Lomond population is partially buffered from drivers of change in salmon populations more widely. In contrast Lomond sea trout showed a similar declining trend to that of populations from the wider west of Scotland over this period. The Lomond populations showed some evidence of shorter-term cycling patterns; the drivers for which are unknown. Body size in salmon and sea trout declined but increased in brown trout; salmon returned to freshwater later, and the relative proportion of all caught trout that were anadromous increased across the time series. This study shows a long and protracted period of fundamental change to populations of these two species over 116 years

Is shape in the eye of the beholder? Assessing landmarking error in geometric morphometric analyses on live fish

Geometric morphometrics is widely used to quantify morphological variation between biological specimens, but the fundamental influence of operator bias on data reproducibility is rarely considered, particularly in studies using photographs of live animals taken under field conditions. We examined this using four independent operators that applied an identical landmarking scheme to replicate photographs of 291 live Atlantic salmon (Salmo salar L.) from two rivers. Using repeated measures tests, we found significant inter-operator differences in mean body shape, suggesting that the operators introduced a systematic error despite following the same landmarking scheme. No significant differences were detected when the landmarking process was repeated by the same operator on a random subset of photographs. Importantly, in spite of significant operator bias, small but statistically significant morphological differences between fish from the two rivers were found consistently by all operators. Pairwise tests of angles of vectors of shape change showed that these between-river differences in body shape were analogous across operator datasets, suggesting a general reproducibility of findings obtained by geometric morphometric studies. In contrast, merging landmark data when fish from each river are digitised by different operators had a significant impact on downstream analyses, highlighting an intrinsic risk of bias. Overall, we show that, even when significant inter-operator error is introduced during digitisation, following an identical landmarking scheme can identify morphological differences between populations. This study indicates that operators digitising at least a sub-set of all data groups of interest may be an effective way of mitigating inter-operator error and potentially enabling data sharing

Evidence of Long-Distance Coastal Sea Migration of Atlantic Salmon, Salmo Salar, Smolts from Northwest England (River Derwent).

Publication history: Accepted - 10 January 2022; Published online - 26 January 2022Background Combining data from multiple acoustic telemetry studies has revealed that west coast England Atlantic salmon (Salmo salar L.) smolts used a northward migration pathway through the Irish Sea to reach their feeding grounds. Hundred Atlantic salmon smolts were captured and tagged in May 2020 in the River Derwent, northwest England as part of an Environment Agency/Natural England funded project. Results Three tagged smolts were detected on marine acoustic receivers distributed across two separate arrays from different projects in the Irish Sea. One fish had migrated approximately 262 km in 10 days from the river mouth at Workington Harbour, Cumbria to the northernmost receiver array operated by the SeaMonitor project; this is the longest tracked marine migration of an Atlantic salmon smolt migrating from the United Kingdom. This migrating fish displayed behaviours which resulted in fast northward migration. The remaining two fish were detected on a receiver array operated by a third project: the Collaborative Oceanography and Monitoring for Protected Areas and Species (COMPASS). Conclusion These detections further provide evidence that migration to reach marine feeding grounds of at least a proportion of salmon smolts from rivers draining into the Irish Sea is northerly, though without a southern marine array it is impossible to conclude that this is the only route. The pattern of these detections would not have been possible without the collaborative efforts of three distinct and separately funded projects to share data. Further work is required to fully understand migration trajectories in this species on the west coast of the British Isles.The main Funding bodies for this project were the Environment Agency, Cumbria and Natural England, Cumbria. Additional funding was provided by The Derwent Owners Association and Bowland Game: Isel Fishings

Inshore and offshore marine migration pathways of Atlantic salmon post-smolts from multiple rivers in Scotland, England, Northern Ireland, and Ireland

The migratory behavior of Atlantic salmon (Salmo salar) post-smolts in coastal waters is poorly understood. In this collaborative study, 1914 smolts, from 25 rivers, in four countries were tagged with acoustic transmitters during a single seasonal migration. In total, 1105 post-smolts entered the marine study areas and 438 (39.6%) were detected on a network of 414 marine acoustic receivers and an autonomous underwater vehicle. Migration pathways (defined as the shortest distance between two detections) of up to 575 km and over 100 days at sea were described for all 25 populations. Post-smolts from different rivers, as well as individuals from the same river, used different pathways in coastal waters. Although difficult to generalize to all rivers, at least during the year of this study, no tagged post-smolts from rivers draining into the Irish Sea were detected entering the areas of sea between the Hebrides and mainland Scotland, which is associated with a high density of finfish aquaculture. An important outcome of this study is that a high proportion of post-smolts crossed through multiple legislative jurisdictions and boundaries during their migration. This study provides the basis for spatially explicit assessment of the impact risk of coastal pressures on salmon during their first migration to sea

Combining acoustic telemetry with a mechanistic model to investigate characteristics unique to successful Atlantic salmon smolt migrants through a standing body of water

The Atlantic salmon, Salmo salar Linnaeus 1758, is a charismatic, anadromous species that has faced dramatic declines throughout its range. There is currently a lack of information on the effect of free-standing bodies of water on a key life event, sea migration, for the species. This study extends our understanding in this area by combining acoustic telemetry with a correlated random walk model to try to examine potential morphological and behavioural factors that differentiate successful from unsuccessful migrants through Scotland’s largest lake. Consistent with other studies, we found that smolts experienced a high rate of mortality in the lake (~ 43%), with approximately 14% potentially predated upon by birds and 4% by Northern pike. Migration speed in the lake was slow (the mean minimum movement speed between centres of activity was 0.13 m/s), and pathways frequently deviated away from the outlet river. There was no evidence of a morphological or behavioural trait or migratory pathway that distinguished successful from unsuccessful smolts. This suggests that migration movement direction in the main body of Loch Lomond appeared to be random. This was further supported by the output of a correlated random walk model which closely resembled the pathway and migration speed and distance patterns displayed by successful migrants. However, once successful smolts came within ~2 km of the lake exit, a high proportion remained in this region prior to entering the River Leven. We suggest that this “goldilocks zone” is where directional cues become apparent to migrating fish. Future studies should combine random walk models with environmental variables to determine if external factors are driving the apparently random movement patterns exhibited by smolts in lakes

Density- and species-dependent errors in single-pass timed electrofishing assessment of riverine salmonids

Electrofishing techniques are widely used for the estimation of the size of stream?dwelling fish populations for both fishery management and scientific study. In contrast to multiple pass, population depletion methods, single?pass catch?per?unit?effort (CPUE) methods are less time?consuming and labour?intensive. A possible issue with the commonly used fixed total time CPUE protocol is that it does not differentiate between the time spent actively fishing and the time incurred while not actively fishing (e.g. removing fish from nets and navigating the site). This issue is likely related to fish density. This study compared two methods of CPUE electrofishing and tested the hypothesis that time spent handling fish and navigating a site can be a source of error in the commonly used fixed total time electrofishing method. Seventy?one sites were sampled across three subcatchments in the Foyle catchment in Northern Ireland. We found a difference in the catch per unit time between the two methods and that this difference increased with fish density. The fixed?time CPUE method also failed to detect a species presence in low?density sites

Counterintuitive migration patterns by Atlantic salmon Salmo salar smolts in a large lake

What little is known about the seaward migration of Salmo salar smolt migration through standing waters indicates that it is both slow and results in high mortality rates, compared with riverine migration. This may be partly because smolts in lakes need to swim more actively and require more complex directional cues than they do in rivers. In this telemetry study of smolt migration through Loch Lomond, S. salar smolts made repeated movements in directions away from the outflowing river, which considerably increased migration time

An opinion piece: the evolutionary and ecological consequences of changing selection pressures on marine migration in Atlantic salmon

There are strong signals that the selection forces favouring the expression of long-distance sea migration by Atlantic salmon (Salmo salar) are changing. Unlike many other behavioural traits, the costs of migration are incurred before any fitness benefits become apparent to the migrant. The expression of this behaviour has thus been shaped by selection forces over multiple generations and cannot respond to short interval (within a single generation) environmental change as many other behavioural traits can. Here we provide a framework to examine the evolutionary and ecological consequences of a sustained increase in migration cost. We argue that Atlantic salmon may have entered an evolutionary trap, where long-distance sea migration has become maladaptive because of shifting environmental conditions. We predict that if higher migration costs (affecting survivorship and ultimately fitness) persist, then shifting selection pressures will result in continuing declines in population size. We suggest, however, that in some populations there is demonstrable capacity for evolutionary rescue responses within the species which is to be found in the variation in the expression of migration. Under a scenario of low to moderate change in the selection forces that previously promoted migration, we argue that disruptive, sex-based selection would result in partial migration, where females retain sea migration but with anadromy loss predominantly in males. With more acute selection forces, anadromy may be strongly selected against, under these conditions both sexes may become freshwater resident. We suggest that as the migration costs appear to be higher in catchments with standing waters, then this outcome is more likely in such systems. We also speculate that as a result of the genetic structuring in this species, not all populations may have the capacity to respond adequately to change. The consequences of this for the species and its management are discussed