Robust estimation of bacterial cell count from optical density

Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals <1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data

Association of Human Mortality with Air Pollution of Hong Kong

In this study, we attempted to investigate the general statistical association of air pollution with the cardiovascular and respiratory mortality of the elderly in Hong Kong. Based on six years of measurements including the major air pollutant concentrations (PM10, SO2, NO, NO2, O3, CO), ambient temperature, and mortality (respiratory, cardiovascular) between 2005 and 2010, correlation analysis was carried out in annual, monthly and weekly time scales. From an annual perspective, it was found that the air pollution species may pose a constant effect on the respiratory and the cardiovascular mortality during the studied period since the elderly mortality rates and the air pollution annual concentrations show obvious constant trends. From a monthly time scale, it was found that NO2 and CO have high positive cross correlation with the respiratory mortality of the following 1 to 2 months. In addition, PM10 and CO also have similar delayed influence on the cardiovascular mortality. Among these four pollutants, only CO was found to exhibit high statistical association in the weekly time scale and it is most related to the cardiovascular mortality of the week after next. Therefore, it was concluded that the effect of air pollution on the elderly mortality of Hong Kong should be cumulative. This study implies that the establishment of weekly or monthly air quality indices is necessary for health implications

Development of a statistical forecasting model for PM

A daily PM2.5 forecasting model based on multiple linear regression (MLR) and backward trajectory clustering of HYSPLIT was designed for its application to small cities where PM2.5 level is easily affected by regional transport. The objective of this study is to investigate the regions that affect the fine particulate concentration of Macau and to develop an effective forecasting system to enhance the capture of PM2.5 episodes. By clustering the HYSPLIT 24-hr backward trajectories originated at Macau from 2015 to 2017, five potential transportation paths of PM2.5 were found. A cluster based statistical model was developed and trained with air quality and meteorological data of2015 and 2016. Then, the trained model was evaluated with data of 2017. Comparing to an ordinary model without backward trajectory clustering, the cluster based PM2.5 forecasting model yielded similar general forecast performance in 2017. However, the critical success index of the cluster based model was 11% higher than that of the ordinary model. This means the cluster based model has better model performance in PM2.5 concentration prediction and it is more important for the health of the public

Association of Human Mortality with Air Pollution of Hong Kong

In this study, we attempted to investigate the general statistical association of air pollution with the cardiovascular and respiratory mortality of the elderly in Hong Kong. Based on six years of measurements including the major air pollutant concentrations (PM10, SO2, NO, NO2, O3, CO), ambient temperature, and mortality (respiratory, cardiovascular) between 2005 and 2010, correlation analysis was carried out in annual, monthly and weekly time scales. From an annual perspective, it was found that the air pollution species may pose a constant effect on the respiratory and the cardiovascular mortality during the studied period since the elderly mortality rates and the air pollution annual concentrations show obvious constant trends. From a monthly time scale, it was found that NO2 and CO have high positive cross correlation with the respiratory mortality of the following 1 to 2 months. In addition, PM10 and CO also have similar delayed influence on the cardiovascular mortality. Among these four pollutants, only CO was found to exhibit high statistical association in the weekly time scale and it is most related to the cardiovascular mortality of the week after next. Therefore, it was concluded that the effect of air pollution on the elderly mortality of Hong Kong should be cumulative. This study implies that the establishment of weekly or monthly air quality indices is necessary for health implications

Enhanced Nitrite Production from the Aqueous Photolysis of Nitrate in the Presence of Vanillic Acid and Implications for the Roles of Light-Absorbing Organics

A prominent source of hydroxyl radicals ((OH)-O-center dot), nitrous acid (HONO) plays a key role in tropospheric chemistry. Apart from direct emission, HONO (or its conjugate base nitrite, NO2-) can be formed secondarily in the atmosphere. Yet, how secondary HONO forms requires elucidation, especially for heterogeneous processes involving numerous organic compounds in atmospheric aerosols. We investigated nitrite production from aqueous photolysis of nitrate for a range of conditions (pH, organic compound, nitrate concentration, and cation). Upon adding small oxygenates such as ethanol, n-butanol, or formate as (OH)-O-center dot scavengers, the average intrinsic quantum yield of nitrite [Phi-(NO2-)] was 0.75 +/- 0.15%. With near-UV-light-absorbing vanillic acid (VA), however, the effective Phi(NO2-) was strongly pHdependent, reaching 8.0 +/- 2.1% at a pH of 8 and 1.5 +/- 0.39% at a more atmospherically relevant pH of 5. Our results suggest that brown carbon (BrC) may greatly enhance the nitrite production from the aqueous nitrate photolysis through photosensitizing reactions, where the triplet excited state of BrC may generate solvated electrons, which reduce nitrate to NO2 for further conversion to nitrite. This photosensitization process by BrC chromophores during nitrate photolysis under mildly acidic conditions may partly explain the missing HONO in urban environments