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    Additional file 1: Table S1. of Integration of VDR genome wide binding and GWAS genetic variation data reveals co-occurrence of VDR and NF-κB binding that is linked to immune phenotypes

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    Showing number of VDR peaks and number of Lead and LD SNPs overlapping with VDR peaks in different cell line models. Number of peaks for individual VDR ChIP-seq data and the number of Lead SNPs along with associated LD SNPs which fall under VDR peaks for each data set is shown here. Table S2. Study design, analytical methods and results. Summary table describing different stages of the analyses including the principal methods (computational approaches, databases and webtools) and key finding from each stage. Table S3. List of 574 SNPs (GWAS + LD SNPs) under VDR peaks. Table S4. List of 42 SNPs showing significant enrichment for associated traits. Table S5. RegulomeDB scores for 42 significant trait associated SNPs. Table S6. Summary of HaploReg results for 42 trait associated SNPs. Table S7. HaploReg summary table of enrichment analysis of enhancers and DNase sensitive regions associated with 42 trait associated SNPs. (XLSX 94 kb
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