An ABC Transporter Is Required for Secretion of Peptide Sex Pheromones in Enterococcus faecalis

ABSTRACT Enterococci are leading causes of hospital-acquired infection in the United States and continue to develop resistances to new antibiotics. Many Enterococcus faecalis isolates harbor pheromone-responsive plasmids that mediate horizontal transfer of even large blocks of chromosomal genes, resulting in hospital-adapted strains over a quarter of whose genomes consist of mobile elements. Pheromones to which the donor cells respond derive from lipoprotein signal peptides. Using a novel bacterial killing assay dependent on the presence of sex pheromones, we screened a transposon mutant library for functions that relate to the production and/or activity of the effector pheromone. Here we describe a previously uncharacterized, but well-conserved, ABC transporter that contributes to pheromone production. Using three distinct pheromone-dependent mating systems, we show that mutants defective in expressing this transporter display a 5- to 6-order-of-magnitude reduction in conjugation efficiency. In addition, we demonstrate that the ABC transporter mutant displays an altered biofilm architecture, with a significant reduction in biofilm biomass compared to that of its isogenic parent, suggesting that pheromone activity also influences biofilm development. The conservation of this peptide transporter across the Firmicutes suggests that it may also play an important role in cell-cell communication in other species within this important phylum

DNA assays for genetic discrimination of three Phragmites australis subspecies in the United States

Premise: To genetically discriminate subspecies of the common reed (Phragmites australis), we developed real-time quantitative (qPCR) assays for identifying P. australis subsp. americanus, P. australis subsp. australis, and P. australis subsp. berlandieri. Methods and Results: Utilizing study-generated chloroplast DNA sequences, we developed three novel qPCR assays. Assays were verified on individuals of each subspecies and against two non-target species, Arundo donax and Phalaris arundinacea. One assay amplifies only P. australis subsp. americanus, one amplifies P. australis subsp. australis and/or P. australis subsp. berlandieri, and one amplifies P. australis subsp. americanus and/or P. australis subsp. australis. This protocol enhances currently available rapid identification methods by providing genetic discrimination of all three subspecies. Conclusions: The newly developed assays were validated using P. australis samples from across the United States. Application of these assays outside of this geographic range should be preceded by additional testing

Biogeographical comparison of the emergent macrophyte, Sagittaria platyphylla in its native and introduced ranges

Understanding why some plant species become invasive is important to predict and prevent future weed threats and identify appropriate management strategies. Many hypotheses have been proposed to explain why plants become invasive, yet few studies have quantitatively compared plant and population parameters between native and introduced range populations to gain an objective perspective on the causes of plant invasion. The present study uses a biogeographical field survey to compare morphological and reproductive traits and abundance between the native range (USA) and two introduced ranges (Australia and South Africa) of Sagittaria platyphylla (Engelm.) J.G. Sm (Alismataceae), a highly invasive freshwater macrophyte. Introduced and native populations differed in sexual reproductive output with the number of achenes per fruiting head and individual achene weight found to be 40% and 50% greater in introduced populations respectively. However, no other morphological traits were found to be consistently different between the native and both introduced ranges, especially after taking into account differences in environmental conditions between the three ranges. Although populations in introduced regions were larger and occupied greater percentage cover, no differences in plant density were evident. Our results suggest that, apart from sexual reproduction, many of the trait patterns observed in S. platyphylla are influenced by environmental and habitat conditions within the native and invaded ranges. We conclude that the enemy release hypothesis best explains the results observed for sexual reproduction. In particular, we hypothesise that a release from natural enemies, specifically a pre-dispersal seed predator, may induce reproductive plasticity in S. platyphylla

The potential for biological control on cryptic plant invasions

Cryptic invasions can be defined as ‘the occurrence of an invasive species or genotype that was not previously recognised as alien in origin or not distinguished from other aliens’. Such invasions can result in negative impacts on the recipient ecosystems and disturb the evolutionary history of native plant populations. Many cryptic invasions have become so problematic that there is a need to implement control measures. This paper explores the potential for biological control to be implemented as a means of managing cryptic invasions. Firstly, the paper defines the different forms of cryptic invasion, differentiating between interspecific and intraspecific invasions; this hierarchy influences how to detect, study and ultimately implement biological control when cryptic invasions occur. Secondly, unique challenges associated with biological control programmes for cryptic invasions are addressed, including: the need for intraspecific level host specificity in agents, the occurrence of hybridisation between native species/lineages and the target weed, the role of enemy release in cryptic invasions in the presence of closely related native plant species/lineages, and a review of potential stakeholder conflicts of interest and legislation. Biological control of cryptic invasions has been shown to be possible, however the process will be more difficult and complex than controlling traditional targets and will likely take up more time and resources. If these challenges are overcome, then biological control programmes against cryptic invasions should be able to proceed and maintain the same standards as traditional biological control programmes

Could enemy release explain invasion success of Sagittaria platyphylla in Australia and South Africa?.

Sagittaria platyphylla (delta arrowhead) is an emergent aquatic macrophyte native to southeastern United States of America that has been introduced into Australia and South Africa as an ornamental pond and aquarium plant. Compared to plants in the native range, S. platyphylla in the introduced range have greater reproductive capacity and form extensive infestations that dominate shallow waterbodies. One explanation for the invasive success of S. platyphylla in introduced countries is that plants are devoid of biotic pressures that would regulate population abundance in their native range (the enemy release hypothesis). We previously reported on field surveys that documented the number of pathogens and insect herbivores associated with S. platyphylla in native and introduced ranges. Here, we quantify the damage caused by these natural enemies to S. platyphylla in the two ranges. As predicted, damage to plants caused by pathogens and insect herbivores was much greater in the native than the introduced range at both the plant and population level. In introduced regions herbivory was low (less than 10%) in every plant part, while in North America insect damage to fruiting heads was 46% (of fruiting heads attacked), damage to leaves was between 33 to 57%, and internal herbivore damage to petioles and the inflorescence scapes was 56% and 43% respectively. Pathogen damage to leaves was between 39 to 57% of leaves per plant affected, compared to 9% in Australia and 8% in South Africa. This lack of biotic resistance from herbivores and disease may have facilitated S. platyphylla invasion in Australia and South Africa

Integrating Invasive Weed Biological Control in Aquatic Ecosystem Restoration Projects

A primary goal of many aquatic ecosystem restoration (AER) projects is to alter and improve plant communities by increasing relative abundance of native species while reducing invasive species abundance, establishment, and spread. Biological control or the use of host-specific pathogens, predators, or herbivores from the native range of a target invader, has been used for invasive plant control, but underutilized as part of integrated pest management (IPM) in government-sponsored AER programs. Weed biological control should be vetted and integrated where possible in all project phases—planning, design, implementation, and maintenance. Using a publicly-funded AER framework—U.S. Army Corps of Engineers or USACE—we define and describe biological control, how it can be seamlessly incorporated at various project stages, a list of common invasive plants that have approved biological controls, and regulatory issues surrounding implementation. Our aim is to illustrate to project managers, planners, environmental personnel, and economists how regulatory agency-approved biological control agents can be a valuable component of AER projects to assist in meeting vegetation community restoration trajectory goals

Association of germline variants in telomere maintenance genes (POT1, TERF2IP, ACD, and TERT) with spitzoid morphology in familial melanoma: A multi-center case series

Spitzoid morphology in familial melanoma has been associated with germline variants in POT1, a telomere maintenance gene (TMG), suggesting a link between telomere biology and spitzoid differentiation. The aim is to assess if familial melanoma cases associated with germline variants in TMG (POT1, ACD, TERF2IP, and TERT ) commonly exhibit spitzoid morphology.Medicin

Effect of Resting Patterns of Tamarins (Saguinus fuscicollis and Saguinus mystax) on the Spatial Distribution of Seeds and Seedling Recruitment

The spatial distributions of dispersed seeds have important evolutionary consequences for plants. Repeated defecations in sites frequently used by seed dispersers can result in high seed concentrations. We observed the resting behavior of a mixed-species group of tamarins in Peru and recorded the occurrence of seed dispersal (over 8 mo) and seed fate (over 11–22 mo) to determine whether the location and use of resting sites influenced the spatial distribution of dispersed seeds and seedlings. The tamarins rested mostly on trees (Saguinus fuscicollis: 60.6%, S. mystax: 89.2%) and dead trunks (S. fuscicollis: 24.4%) and used 61% of their resting sites repeatedly. During both the dry and wet seasons, tamarins dispersed significantly more seeds within resting areas (0.00662 and 0.00424 seeds/m2, respectively) than outside them (0.00141 and 0.00181 seeds/m2). Seed survival and seedling recruitment did not differ significantly between resting and other areas, resulting in a higher seedling concentration around the resting sites. Seed density did not increase with the duration or the frequency of use of the resting sites but did increase when we pooled the seasonal resting sites together in 50 m × 50 m quadrats, ultimately causing a clumped distribution of dispersed seeds. The use of resting sites in secondary forest, particularly during the dry season, allows the creation of seedling recruitment centers for species coming from the primary forest. Our findings show that tamarin resting behavior affects the spatial distribution of dispersed seeds and seedlings, and their resting sites play an important role in plant diversity maintenance and facilitate forest regeneration in degraded areas

Association of Variants in the SPTLC1 Gene With Juvenile Amyotrophic Lateral Sclerosis

Importance: Juvenile amyotrophic lateral sclerosis (ALS) is a rare form of ALS characterized by age of symptom onset less than 25 years and a variable presentation.Objective: To identify the genetic variants associated with juvenile ALS.Design, Setting, and Participants: In this multicenter family-based genetic study, trio whole-exome sequencing was performed to identify the disease-associated gene in a case series of unrelated patients diagnosed with juvenile ALS and severe growth retardation. The patients and their family members were enrolled at academic hospitals and a government research facility between March 1, 2016, and March 13, 2020, and were observed until October 1, 2020. Whole-exome sequencing was also performed in a series of patients with juvenile ALS. A total of 66 patients with juvenile ALS and 6258 adult patients with ALS participated in the study. Patients were selected for the study based on their diagnosis, and all eligible participants were enrolled in the study. None of the participants had a family history of neurological disorders, suggesting de novo variants as the underlying genetic mechanism.Main Outcomes and Measures: De novo variants present only in the index case and not in unaffected family members.Results: Trio whole-exome sequencing was performed in 3 patients diagnosed with juvenile ALS and their parents. An additional 63 patients with juvenile ALS and 6258 adult patients with ALS were subsequently screened for variants in the SPTLC1 gene. De novo variants in SPTLC1 (p.Ala20Ser in 2 patients and p.Ser331Tyr in 1 patient) were identified in 3 unrelated patients diagnosed with juvenile ALS and failure to thrive. A fourth variant (p.Leu39del) was identified in a patient with juvenile ALS where parental DNA was unavailable. Variants in this gene have been previously shown to be associated with autosomal-dominant hereditary sensory autonomic neuropathy, type 1A, by disrupting an essential enzyme complex in the sphingolipid synthesis pathway.Conclusions and Relevance: These data broaden the phenotype associated with SPTLC1 and suggest that patients presenting with juvenile ALS should be screened for variants in this gene.</p