3 research outputs found

    NH<sub>3</sub> as a Strong H‑Bond Donor in Singly- and Doubly-Bridged Ammonia Solvent Clusters: 2‑Pyridone·(NH<sub>3</sub>)<sub><i>n</i></sub>, <i>n</i> = 1–3

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    Mass- and isomer-selected infrared spectra of 2-pyridone·(NH<sub>3</sub>)<sub><i>n</i></sub> clusters with <i>n</i> = 1–3 were measured in the NH and CH stretch fundamental region (2400–3700 cm<sup>–1</sup>) using infrared (IR) laser depletion spectroscopy combined with resonant two-photon ionization UV laser detection. The IR depletion spectra reveal three different H-bonding topologies of these clusters: The <i>n</i> = 1 and 2 clusters form ammonia bridges stretching from the N–H to the CO group of the <i>cis</i>-amide function of 2-pyridone (2PY), giving rise to intense and strongly red-shifted (2PY)­NH and ammonia NH stretch bands. For <i>n</i> = 3, two isomers (3X and 3Y) are observed in the IR spectra: The spectrum of 3X is compatible with an ammonia-bridge structure like <i>n</i> = 2, with the third NH<sub>3</sub> accepting an H-bond from C<sup>6</sup>–H of 2PY. The IR spectrum of 3Y exhibits a broad IR band in the 2500–3000 cm<sup>–1</sup> range and is characteristic of a bifurcated double-bridged structure in which the first NH3 accepts an H-bond from the (2PY)­NH and donates two H-bonds to the other two ammonias, both of which donate to the CO group of 2PY. This double-donor/double-bridge H-bonding pattern increases the acceptor strength of the first ammonia and dramatically lowers the (2PY)­NH stretching frequency to ∼2700 cm<sup>–1</sup>. For all clusters the ammonia 2ν<sub>4</sub> HNH bend overtones in the 3180–3320 cm<sup>–1</sup> region gain intensity by anharmonic coupling (Fermi resonance) to the hydrogen-bonded ammonia NH stretches, which are red-shifted into the 3250–3350 cm<sup>–1</sup> region. The experimental results are supported by optimized structures, vibrational frequencies, and IR intensities calculated using density-functional theory with the B3LYP and PW91 functionals, as well as with the more recent functionals B97-D and M06-2X, which are designed to include long-range dispersive interactions

    Excited-State Structure and Dynamics of Keto–Amino Cytosine: The <sup>1</sup>ππ* State Is Nonplanar and Its Radiationless Decay Is Not Ultrafast

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    We have measured the mass- and tautomer-specific S<sub>0</sub> → S<sub>1</sub> vibronic spectra and S<sub>1</sub> state lifetimes of the keto–amino tautomer of cytosine cooled in supersonic jets, using two-color resonant two-photon ionization (R2PI) spectroscopy at 0.05 cm<sup>–1</sup> resolution. The rotational contours of the 0<sub>0</sub><sup>0</sup> band and nine vibronic bands up to +437 cm<sup>–1</sup> are polarized in the pyrimidinone plane, proving that the electronic excitation is to a <sup>1</sup>ππ* state. All vibronic excitations up to +437 cm<sup>–1</sup> are overtone and combination bands of the low-frequency out-of-plane ν<sub>1</sub><sup>′</sup> (butterfly), ν<sub>2</sub><sup>′</sup> (boat), and ν<sub>3</sub><sup>′</sup> (H–N–C<sup>6</sup>–H twist) vibrations. UV vibronic spectrum simulations based on approximate second-order coupled-cluster (CC2) calculations of the ground and <sup>1</sup>ππ* states are in good agreement with the experimental R2PI spectrum, but only if the calculated ν<sub>1</sub><sup>′</sup> and ν<sub>2</sub><sup>′</sup> frequencies are reduced by a factor of 4 and anharmonicity is included. Together with the high intensity of the ν<sub>1</sub><sup>′</sup> and ν<sub>2</sub><sup>′</sup> overtone vibronic excitations, this implies that the <sup>1</sup>ππ* potential energy surface is much softer and much more anharmonic in the out-of-plane directions than predicted by the CC2 method. The <sup>1</sup>ππ* state lifetime is determined from the Lorentzian line broadening necessary to reproduce the rotational band contours: at the 0<sub>0</sub><sup>0</sup> band it is τ = 44 ps, remains at τ = 35–45 ps up to +205 cm<sup>–1</sup>, and decreases to 25–30 ps up to +437 cm<sup>–1</sup>. These lifetimes are 20–40 times longer than the 0.5–1.5 ps lifetimes previously measured with femtosecond pump–probe techniques at higher vibrational energies (1500–3800 cm<sup>–1</sup>). Thus, the nonradiative relaxation rate of keto–amino cytosine close to the <sup>1</sup>ππ* state minimum is <i>k</i><sub>nr</sub> ∼ 2.5 × 10<sup>10</sup> s<sup>–1</sup>, much smaller than at higher energies. An additional nonradiative decay channel opens at +500 cm<sup>–1</sup> excess energy. Since high overtone bands of ν<sub>1</sub><sup>′</sup> and ν<sub>2</sub><sup>′</sup> are observed in the R2PI spectrum but only a single weak 2ν<sub>3</sub><sup>′</sup> band, we propose that ν<sub>3</sub><sup>′</sup> is a promoting mode for nonradiative decay, consistent with the observation that the ν<sub>3</sub><sup>′</sup> normal-mode eigenvector points toward the “C<sup>6</sup>-puckered” conical intersection geometry

    Gas-Phase Cytosine and Cytosine‑N<sub>1</sub>‑Derivatives Have 0.1–1 ns Lifetimes Near the S<sub>1</sub> State Minimum

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    Ultraviolet radiative damage to DNA is inefficient because of the ultrafast S<sub>1</sub> ⇝ S<sub>0</sub> internal conversion of its nucleobases. Using picosecond pump–ionization delay measurements, we find that the S<sub>1</sub>(<sup>1</sup><i>ππ</i>*) state vibrationless lifetime of gas-phase keto-amino cytosine (Cyt) is τ = 730 ps or ∼700 times longer than that measured by femtosecond pump–probe ionization at higher vibrational excess energy, <i>E</i><sub>exc</sub>. N<sub>1</sub>-Alkylation increases the S<sub>1</sub> lifetime up to τ = 1030 ps for N<sub>1</sub>-ethyl-Cyt but decreases it to 100 ps for N<sub>1</sub>-isopropyl-Cyt. Increasing the vibrational energy to <i>E</i><sub>exc</sub> = 300–550 cm<sup>–1</sup> decreases the lifetimes to 20–30 ps. The nonradiative dynamics of S<sub>1</sub> cytosine is not solely a property of the amino-pyrimidinone chromophore but is strongly influenced by the N<sub>1</sub>-substituent. Correlated excited-state calculations predict that the gap between the S<sub>2</sub>(<sup>1</sup><i>n</i><sub>O</sub>π*) and S<sub>1</sub>(<sup>1</sup><i>ππ</i>*) states decreases along the series of N<sub>1</sub>-derivatives, thereby influencing the S<sub>1</sub> state lifetime
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