28 research outputs found
Identification of novel Coxiella burnetii genotypes from Ethiopian ticks
Background:
Coxiella burnetii
, the etiologic agent of Q fever, is a highly infectious
zoonotic bacterium. Genetic information about the strains of this worldwide
distributed agent circulating on the African continent is limited. The aim of the
present study was the genetic characterization of
C. burnetii
DNA samples
detected in ticks collected from Ethiopian cattle and their comparison with other
genotypes found previously in other parts of the world.
Methodology/Principal Findings:
A total of 296 tick samples were screened by
real-time PCR targeting the IS
1111
region of
C. burnetii
genome and from the 32
positive samples, 8 cases with sufficient
C. burnetii
DNA load (
Amblyomma
cohaerens
,n
5
6;
A. variegatum
,n
5
2) were characterized by multispacer sequence
typing (MST) and multiple-locus variable-number tandem repeat analysis (MLVA).
One novel sequence type (ST), the proposed ST52, was identified by MST. The
MLVA-6 discriminated the proposed ST52 into two newly identified MLVA
genotypes: type 24 or AH was detected in both
Amblyomma
species while type 26
or AI was found only in
A. cohaerens
.
Conclusions/Significance:
Both the MST and MLVA genotypes of the present
work are closely related to previously described genotypes found primarily in cattle
samples from different parts of the globe. This finding is congruent with the source
hosts of the analyzed Ethiopian ticks, as these were also collected from cattle. The
present study provides genotype information of
C. burnetii
from this seldom studied
East-African region as well as further evidence for the presumed host-specific
adaptation of this agent
Within-host evolution of Burkholderia pseudomallei in four cases of acute melioidosis
Little is currently known about bacterial pathogen evolution and adaptation within the host during acute infection. Previous studies of Burkholderia pseudomallei, the etiologic agent of melioidosis, have shown that this opportunistic pathogen mutates rapidly both in vitro and in vivo at tandemly repeated loci, making this organism a relevant model for studying short-term evolution. In the current study, B. pseudomallei isolates cultured from multiple body sites from four Thai patients with disseminated melioidosis were subjected to fine-scale genotyping using multilocus variable-number tandem repeat analysis (MLVA). In order to understand and model the in vivo variable-number tandem repeat (VNTR) mutational process, we characterized the patterns and rates of mutations in vitro through parallel serial passage experiments of B. pseudomallei. Despite the short period of infection, substantial divergence from the putative founder genotype was observed in all four melioidosis cases. This study presents a paradigm for examining bacterial evolution over the short timescale of an acute infection. Further studies are required to determine whether the mutational process leads to phenotypic alterations that impact upon bacterial fitness in vivo. Our findings have important implications for future sampling strategies, since colonies in a single clinical sample may be genetically heterogeneous, and organisms in a culture taken late in the infective process may have undergone considerable genetic change compared with the founder inoculum