Revisiting the Role of TGFβ Receptor Internalization for Smad Signaling: It is Not Required in Optogenetic TGFβ Signaling Systems

Endocytosis is an important process by which many signaling receptors reach their intracellular effectors. Accumulating evidence suggests that internalized receptors play critical roles in triggering cellular signaling, including transforming growth factor β (TGFβ) signaling. Despite intensive studies on the TGFβ pathway over the last decades, the necessity of TGFβ receptor endocytosis for downstream TGFβ signaling responses is a subject of debate. In this study, mathematical modeling and synthetic biology approaches are combined to re-evaluate whether TGFβ receptor internalization is indispensable for inducing Smad signaling. It is found that optogenetic systems with plasma membrane-tethered TGFβ receptors can induce fast and sustained Smad2 activation upon light stimulations. Modeling analysis suggests that endocytosis is precluded for the membrane-anchored optogenetic TGFβ receptors. Therefore, this study provides new evidence to support that TGFβ receptor internalization is not required for Smad2 activation

Evaluation of the Dietary Effect of Hallabong Peel Oil on Growth, Hematological, and Immune Gene Expression in Rock Bream, Oplegnathus fasciatus Challenged with Edwardsiella tarda

In the present study we evaluated the dietary effect of Hallabong peel oil (HPO) on growth, disease resistance, and immune gene expression of rock bream, Oplegnathus fasciatus challenged with Edwardsiella tarda after a 4 week feeding trial with 5 treatments: control-C, probiotic–P, HPO (0.1%), HPO (0.5%), and P+HPO, diets. All fish groups were assessed for growth performance, innate immune parameters, serum biochemical profile, and immune gene expression in head kidney on 2nd, and 4th week, and 1st, 3rd and 7th day post infection with Edwardsiella tarda. Fish fed the HPO enriched diets showed increased growth performance with significantly decreased (P>0.05) mortality compared with the control and probiotic diet groups. The positive effects of HPO enriched diet were also found in all assessed innate immune and biochemical parameters which included increased respiratory burst and lysozyme activity, with significantly increased erythrocyte and leukocytes counts, increased serum protein, decreased glucose, triglycerides, cholesterol level in serum compared with control diet fed fish. Moreover, the probiotic bacterial count in the intestine of fish was enhanced with the HPO diet and the P+HPO diet compared to fish fed the probiotic diet. The head kidney of HPO enriched diet fed fish showed up-regulated expression of inflammatory cytokines genes such as TNFα, IL-1β, and FST, after 4th week of feeding trial which was increased ~2 to 3 times on 1dpi and 3 dpi. These results indicate that limonene rich (91.26%), HPO enriched diets enhance growth and immunity and enhance disease resistance of Oplegnathus fasciatus challenged against E. tarda

Changes in inorganic aerosol compositions over the Yellow Sea area from impact of Chinese emissions mitigation

Substantial mitigation of air pollutants emissions has been performed since 2013 around Beijing, and changes in the atmospheric characteristics have been expected over the downstream area of Beijing. In this study, both WRF-Chem simulation and on-site measurements were utilized for the Baengnyeong (island) supersite, one of the representative regional background sites located in the Yellow Sea, the entrance area of the long-range transport process in Korea. The changes in the chemical compositions of inorganic aerosols were examined for spring-time during the Chinese emission mitigation period from 2014 to 2016. The measured ratio of ionic species to PM2.5 at the Baengnyeong supersite showed changes in aerosol inorganic chemical compositions from sulfate in 2014 to nitrate in 2015–2016. The modeling results also showed that nitrate was low in 2014 and significantly increased in 2015 and 2016, and the acidic aerosol condition had also changed toward a more neutralized status in both the simulation and the observations. The WRF-Chem modeling study further indicated that the sulfur was not neutralized in 2014. However, in 2015 and 2016, SO2 was more sufficiently neutralized as sulfur emissions were substantially reduced in China, while at the same time nitrate had begun to increase in such a ‘SO2–poor’ condition in Beijing area in China, and thus approaching more enhanced neutralization over the Yellow Sea area. The causes of the higher nitrate based on the modeled characteristics of the ammonia-sulfate-nitrate aerosol formation in response to the SO2 emissions reduction in China are also discussed in this paper

Chemical Accident Hazard Assessment by Spatial Analysis of Chemical Factories and Accident Records in South Korea

This study identified the potential chemical accident occurrence in Korea by analyzing the spatial distribution of chemical factories and accidents. The number of chemical factories and accidents in 25-km2 grids were used as the attribute value for spatial analysis. First, semi-variograms were conducted to examine spatial distribution patterns and to identify spatial autocorrelation of chemical factories and accidents. Semi-variograms explained that the spatial distribution of chemical factories and accidents were spatially autocorrelated. Second, the results of the semi-variograms were used in Ordinary Kriging to estimate chemical hazard levels. The level values were extracted from the Ordinary Kriging result and their spatial similarity was examined by juxtaposing the two values with respect to their location. Six peaks were identified in both the factory hazard and accident hazard estimation result, and the peaks correlated with major cities in Korea. Third, the estimated two hazard levels were classified with geometrical interval and could be classified into four quadrants: Low Factory and Low Accident (LFLA), High Factory and Low Accident (HFLA), Low Factory and High Accident(LFHA), and High Factory and High Accident (HFHA). The 4 groups identified different chemical safety management issues in Korea; safe LFLA group, many chemical reseller factories were found in HFLA group, chemical transportation accidents were in the LFHA group, and an abundance of factories and accidents were in the HFHA group. Each quadrant represented different safety management obstacles in Korea, and studying spatial differences can support the establishment of an efficient risk management plan

Bioethanol Production from Ulva pertusa Kjellman by High-temperature Liquefaction

This work was investigated to improve hydrolysis yields of macro alga, Ulva pertusa Kjellman by high-temperature liquefaction process (HTLP). We hydrolyzed this alga to produce bioethanol. U. pertusa Kjellman contains approximately w = 32 % glucose, comprising w = 6 % cellulose and 20 % starch, along with w = 5.9 % xylose. Among 32 % of total carbohydrates, ca. 26 % of glucose was hydrolyzed from starch (20 %) and cellulose (6 %), respectively, which tells that a more efficient process might be considered to completely hydrolyze the polymers containing fermentable sugars such as glucose and galctose, etc. Optimal hydrolysis conditions for the high-temperature liquefaction process (HTLP) were determined to be 15 MPa and 150 °C for 15 min, with water as the solvent. We found that the process temperature and time were the most important factors in the operation. Under these conditions, the conversion yields of glucose and xylose were 9.08 and 21.14 %, respectively. After cellulase and amyloglucosidase treatment, 61.1 % glucose (based on w = 32.1 %, dry basis) was converted into glucose without further conversion into xylose. The present process provided 3.1 to 12.6 % higher overall hydrolysis yields from U. pertusa Kjellman than those from other agricultural biomass. The HTLP process generated only about 40 mg L–1 of HMF (5-hydroxymethylfurfural). This concentration was much less than those from other pretreatment processes and resulted in approximately 90 % of the maximum theoretical ethanol yield. In addition, the hydrolysis pattern of U. pertusa Kjellman was much different from those of agricultural biomass materials due to different starch compositions and polymer structures

An unusual anatomical variant of the left phrenic nerve encircling the transverse cervical artery

During educational dissection of cadavers, we encountered anatomical variability of the left phrenic nerve. In this cadaver, nerve fibers from C3 and C4 descended and crossed behind the transverse cervical artery (TCA), a branch of the thyrocervical trunk, at the level of the anterior scalene muscle. On the other hand, nerve fibers from C5 descended obliquely above the TCA and then joined the fibers from C3-4 on the medial side of the anterior scalene muscle to form the phrenic nerve. To our knowledge, the encircling of the TCA by the left phrenic nerve in the neck has not yet been reported and may pose as a potential risk for nerve compression during movement of the neck. We discuss several types of anatomical variants of the phrenic nerve and the associated risk during thorax and neck dissection procedures

Band gap opening by two-dimensional manifestation of Peierls instability in graphene

Using first-principles calculations of graphene having high-symmetry distortion or defects, we investigate band gap opening by chiral symmetry breaking, or intervalley mixing, in graphene and show an intuitive picture of understanding the gap opening in terms of local bonding and antibonding hybridizations. We identify that the gap opening by chiral symmetry breaking in honeycomb lattices is an ideal two-dimensional (2D) extension of the Peierls metal-insulator transition in 1D linear lattices. We show that the spontaneous Kekule distortion, a 2D version of the Peierls distortion, takes place in biaxially strained graphene, leading to structural failure. We also show that the gap opening in graphene antidots and armchair nanoribbons, which has been attributed usually to quantum confinement effects, can be understood with the chiral symmetry breaking