Predicting the epidemic threshold of the susceptible-infected-recovered model

Researchers have developed several theoretical methods for predicting epidemic thresholds, including the mean-field like (MFL) method, the quenched mean-field (QMF) method, and the dynamical message passing (DMP) method. When these methods are applied to predict epidemic threshold they often produce differing results and their relative levels of accuracy are still unknown. We systematically analyze these two issues---relationships among differing results and levels of accuracy---by studying the susceptible-infected-recovered (SIR) model on uncorrelated configuration networks and a group of 56 real-world networks. In uncorrelated configuration networks the MFL and DMP methods yield identical predictions that are larger and more accurate than the prediction generated by the QMF method. When compared to the 56 real-world networks, the epidemic threshold obtained by the DMP method is closer to the actual epidemic threshold because it incorporates full network topology information and some dynamical correlations. We find that in some scenarios---such as networks with positive degree-degree correlations, with an eigenvector localized on the high $k$-core nodes, or with a high level of clustering---the epidemic threshold predicted by the MFL method, which uses the degree distribution as the only input parameter, performs better than the other two methods. We also find that the performances of the three predictions are irregular versus modularity

Orbit- and Atom-Resolved Spin Textures of Intrinsic, Extrinsic and Hybridized Dirac Cone States

Combining first-principles calculations and spin- and angle-resolved photoemission spectroscopy measurements, we identify the helical spin textures for three different Dirac cone states in the interfaced systems of a 2D topological insulator (TI) of Bi(111) bilayer and a 3D TI Bi2Se3 or Bi2Te3. The spin texture is found to be the same for the intrinsic Dirac cone of Bi2Se3 or Bi2Te3 surface state, the extrinsic Dirac cone of Bi bilayer state induced by Rashba effect, and the hybridized Dirac cone between the former two states. Further orbit- and atom-resolved analysis shows that s and pz orbits have a clockwise (counterclockwise) spin rotation tangent to the iso-energy contour of upper (lower) Dirac cone, while px and py orbits have an additional radial spin component. The Dirac cone states may reside on different atomic layers, but have the same spin texture. Our results suggest that the unique spin texture of Dirac cone states is a signature property of spin-orbit coupling, independent of topology

Carbon-doped ZnO: A New Class of Room Temperature Dilute Magnetic Semiconductor

We report magnetism in carbon doped ZnO. Our first-principles calculations based on density functional theory predicted that carbon substitution for oxygen in ZnO results in a magnetic moment of 1.78 $\mu_B$ per carbon. The theoretical prediction was confirmed experimentally. C-doped ZnO films deposited by pulsed laser deposition with various carbon concentrations showed ferromagnetism with Curie temperatures higher than 400 K, and the measured magnetic moment based on the content of carbide in the films ($1.5 - 3.0 \mu_B$ per carbon) is in agreement with the theoretical prediction. The magnetism is due to bonding coupling between Zn ions and doped C atoms. Results of magneto-resistance and abnormal Hall effect show that the doped films are $n$-type semiconductors with intrinsic ferromagnetism. The carbon doped ZnO could be a promising room temperature dilute magnetic semiconductor (DMS) and our work demonstrates possiblity of produing DMS with non-metal doping.Comment: REVtex source with 4 figures in eps forma

Massive Domain Wall Fermions on Four-dimensional Anisotropic Lattices

We formulate the massive domain wall fermions on anisotropic lattices. For the massive domain wall fermion, we find that the dispersion relation assumes the usual form in the low momentum region when the bare parameters are properly tuned. The quark self-energy and the quark field renormalization constants are calculated to one-loop in bare lattice perturbation theory. For light domain wall fermions, we verified that the chiral mode is stable against quantum fluctuations on anisotropic lattices. This calculation serves as a guidance for the tuning of the parameters in the quark action in future numerical simulations.Comment: 36 pages, 14 figures, references adde

One-Loop Effect of Null-Like Cosmology's Holographic Dual Super-Yang-Mills

We calculate the 1-loop effect in super-Yang-Mills which preserves 1/4-supersymmetries and is holographically dual to the null-like cosmology with a big-bang singularity. Though the bosonic and fermionic spectra do not agree precisely, we do obtain vanishing 1-loop vacuum energy for generic warped plane-wave type backgrounds with a big-bang singularity. Moreover, we find that the cosmological "constant" contributed either by bosons or fermions is time-dependent. The issues about the particle production of some background and about the UV structure are also commented. We argue that the effective higher derivative interactions are suppressed as long as the Fourier transform of the time-dependent coupling is UV-finite. Our result holds for scalar configurations that are BPS but with arbitrary time-dependence. This suggests the existence of non-renormalization theorem for such a new class of time-dependent theories. Altogether, it implies that such a super-Yang-Mills is scale-invariant, and that its dual bulk quantum gravity might behave regularly near the big bang.Comment: 20 pages, v2 add comments and references, v3 clarify BPS condition & add new discussion on particle production and UV structure, v4&v5 minor changes, final to JHE

Sharp estimates on the first eigenvalue of the p-Laplacian with negative Ricci lower bound

We complete the picture of sharp eigenvalue estimates for the p-Laplacian on a compact manifold by providing sharp estimates on the first nonzero eigenvalue of the nonlinear operator $\Delta_p$ when the Ricci curvature is bounded from below by a negative constant. We assume that the boundary of the manifold is convex, and put Neumann boundary conditions on it. The proof is based on a refined gradient comparison technique and a careful analysis of the underlying model spaces.Comment: Sign mistake fixed in the proof of the gradient comparison theorem (theorem 5.1 pag 10), and some minor improvements aroun

Computing the lower and upper bounds of Laplace eigenvalue problem: by combining conforming and nonconforming finite element methods

This article is devoted to computing the lower and upper bounds of the Laplace eigenvalue problem. By using the special nonconforming finite elements, i.e., enriched Crouzeix-Raviart element and extension $Q_1^{\rm rot}$, we get the lower bound of the eigenvalue. Additionally, we also use conforming finite elements to do the postprocessing to get the upper bound of the eigenvalue. The postprocessing method need only to solve the corresponding source problems and a small eigenvalue problem if higher order postprocessing method is implemented. Thus, we can obtain the lower and upper bounds of the eigenvalues simultaneously by solving eigenvalue problem only once. Some numerical results are also presented to validate our theoretical analysis.Comment: 19 pages, 4 figure