Adsorption-Induced Deformation in Nanopores: Unexpected Results Obtained by Molecular Simulations

International audienceThe adsorption of a fluid in a nanoporous material induces deformations of the solid. The saturating regime, where the solid is filled with liquid, generally exhibits a linear relationship between the liquid pressure and the solid strain. This provides an experimental way to measure the elastic moduli of the solid walls. For large pores, the strain is determined by the pressure of the liquid saturating the pores and the mechanical properties of the porous solid. What happens at the nanometric scale, where liquid/matrix interfacial effects dominate? We have performed molecular simulations of a simple Lennard-Jones fluid confined between deformable nanoplatelets. The simulations provide the deformation of the nanopore as a function of the liquid pressure, in a way similar to what is done experimentally. The results show unexpected interface effects, which could be relevant to experimental data analysis

A colanic acid operon deletion mutation enhances induction of early antibody responses by live attenuated salmonella vaccine strains

Colanic acid (CA) is a common exopolysaccharide produced by many genera in the Enterobacteriaceae. It is critical for biofilm formation on HEp-2 cells and on chicken intestinal tissue by Salmonella. In this study, we generated different CA synthesis gene mutants and evaluated the immune responses induced by these mutants. One of these mutations, Δ(wza-wcaM)8, which deleted the whole operon for CA synthesis, was introduced into two Salmonella vaccine strains attenuated by auxotrophic traits or by the regulated delayed attenuation strategy (RDAS). The mice immunized with the auxotrophic Salmonella vaccine strain with the deletion mutation Δ(wza-wcaM)8 developed higher vaginal IgA titers against the heterologous protective antigen and higher levels of antigen-specific IgA secretion cells in lungs. In Salmonella vaccine strains with RDAS, the strain with the Δ(wza-wcaM)8 mutation resulted in higher levels of protective antigen production during in vitro growth. Mice immunized with this strain developed higher serum IgG and mucosal IgA antibody responses at 2 weeks. This strain also resulted in better gamma interferon (IFN-γ) responses than the strain without this deletion at doses of 10(8) and 10(9) CFU. Thus, the mutation Δ(wza-wcaM)8 will be included in various recombinant attenuated Salmonella vaccine (RASV) strains with RDAS derived from Salmonella enterica serovar Paratyphi A and Salmonella enterica serovar Typhi to induce protective immunity against bacterial pathogens

Systems Biology Approach Predicts Antibody Signature Associated with Brucella melitensis Infection in Humans

A complete understanding of the factors that determine selection of antigens recognized by the humoral immune response following infectious agent challenge is lacking. Here we illustrate a systems biology approach to identify the antibody signature associated with Brucella melitensis (Bm) infection in humans and predict proteomic features of serodiagnostic antigens. By taking advantage of a full proteome microarray expressing previously cloned 1406 and newly cloned 1640 Bm genes, we were able to identify 122 immunodominant antigens and 33 serodiagnostic antigens. The reactive antigens were then classified according to annotated functional features (COGs), computationally predicted features (e.g., subcellular localization, physical properties), and protein expression estimated by mass spectrometry (MS). Enrichment analyses indicated that membrane association and secretion were significant enriching features of the reactive antigens, as were proteins predicted to have a signal peptide, a single transmembrane domain, and outer membrane or periplasmic location. These features accounted for 67% of the serodiagnostic antigens. An overlay of the seroreactive antigen set with proteomic data sets generated by MS identified an additional 24%, suggesting that protein expression in bacteria is an additional determinant in the induction of Brucella-specific antibodies. This analysis indicates that one-third of the proteome contains enriching features that account for 91% of the antigens recognized, and after B. melitensis infection the immune system develops significant antibody titers against 10% of the proteins with these enriching features. This systems biology approach provides an empirical basis for understanding the breadth and specificity of the immune response to B. melitensis and a new framework for comparing the humoral responses against other microorganisms

Detection of Low-energy Breaks in Gamma-Ray Burst Prompt Emission Spectra

The radiative process responsible for gamma-ray burst (GRB) prompt emission has not been identified yet. If dominated by fast-cooling synchrotron radiation, the part of the spectrum immediately below the nF n peak energy should display a power-law behavior with slope a2 = -3 2, which breaks to a higher value a1 = -2 3 (i.e., to a harder spectral shape) at lower energies. Prompt emission spectral data (usually available down to 3c10 20 keV) are consistent with one single power-law behavior below the peak, with typical slope a = -1, higher than (and then inconsistent with) the expected value \u3b12= -3 2. To better characterize the spectral shape at low energy, we analyzed 14 GRBs for which the Swift X-ray Telescope started observations during the prompt. When available, Fermi-GBM observations have been included in the analysis. For 67% of the spectra, models that usually give a satisfactory description of the prompt (e.g., the Band model) fail to reproduce the 0.51000 keV spectra: lowenergy data outline the presence of a spectral break around a few keV. We then introduce an empirical fitting function that includes a low-energy power law a1, a break energy Ebreak, a second power law \u3b12, and a peak energy Epeak. We find \u3c31 = -0.66 (s = 0.35), log keV 0.63 ( ) Ebreak = (s = 0.20), \u3c32 = -1.46 (s = 0.31), and log keV 2.1 (Epeak) = (s = 0.56). The values \u3c31 and \u3c32 are very close to expectations from synchrotron radiation. In this context, Ebreak corresponds to the cooling break frequency. The relatively small ratio Epeak break E 3c 30 suggests a regime of moderately fast cooling, which might solve the long-lasting problem of the apparent inconsistency between measured and predicted low-energy spectral index