Additional file 2 of Whole genome sequence analysis of equid gammaherpesvirus -2 field isolates reveals high levels of genomic diversity and recombination

Additional file 2: Table S1. Summary of sequencing metrics and assembly for EHV2 isolates. Table S2. Percentage nucleotide identity between EHV2 isolates. Table S3. Analysis of the overall selective pressure acting on EHV2 genes. Calculations of non-synonymous substitutions per non-synonymous site (Ka) to synonymous substitution per synonymous site (Ks) ratios for all EHV2 genes, along with standard errors based on 1,000 bootstrap replicates. Table S4. Details of the genes included in the study and their accession numbers. Table S5. Recombination breakpoint analysis of 20 EHV2 strains including strains 86/67 and G9/92