Seven theoretical reasons for using individual-based modeling in Ecology

A modelagem baseada no indivíduo tem sido crescentemente empregada para analisar processos ecológicos, desenvolver e avaliar teorias, bem como para fins de manejo da vida silvestre e conservação. Os modelos baseados no indivíduo (MBI) são bastante flexíveis, permitem o uso detalhado de parâmetros com maior significado biológico, sendo portanto mais realistas do que modelos populacionais clássicos, mais presos dentro de um rígido formalismo matemático. O presente artigo apresenta e discute sete razões para a adoção dos MBI em estudos de simulação na Ecologia: (1) a inerente complexidade de sistemas ecológicos, impassíveis de uma análise matemática formal; (2) processos populacionais são fenômenos emergentes, resultando das interações entre seus elementos constituintes (indivíduos) e destes com o meio; (3) poder de predição; (4) a adoção definitiva, por parte da Ecologia, de uma visão evolutiva; (5) indivíduos são entidades discretas; (6) interações são localizadas no espaço e (7) indivíduos diferem entre si.Individual-based modeling has been increasingly used to analyze ecological processes, to develop and to evaluate theories, as well as to the management of wild life and conservation. The individual-based models (IBM) are quite flexible, allowing a detailed inclusion of parameters with greater biological meaning, therefore being more realistic than classical population models, which are too constrained inside mathematical formalisms. The present paper discuss seven reasons for IBM to be adopted in simulation studies inside Ecology: (1) ecological systems are inherently complex, being not open to a complete formal mathematical analysis; (2) population processes are emergent outputs from the interactions among individuals and the environment; (3) predictive power; (4) the evolutive view as a definitive guide for ecological studies; (5) individuals are discrete entities; (6) interactions are localized in space and (7) individuals present differences among them

An index for defaunation

Defaunation, originally conceived as the loss of large vertebrates due to hunting or fragmentation, has been widely used in conservation studies yet the term has been arbitrarily used and poorly defined. Here we refine this term by creating a quantitative index that can be used to compare ecological communities over large zoogeographical regions. We propose a defaunation index (. D) as a weighted measure of dissimilarity between the current assemblage of a given location and a reference assemblage that represents a historical and/or unperturbed state. We analyzed the index by means of three case studies that included two empirical assessments of mammal communities in Neotropical rainforests and one hypothetical example, encompassing a variety of criteria to quantify differences in species density and importance. These cases illustrate the broad range of index applicability and show that incorporating functional differences among species, such as those based on body size, conservation status or evolutionary originality can add important information beyond simply species richness. © 2013 Elsevier Ltd

Energetic constraints to food chain length in a metacommunity framework

As metabolism increases with body size, populations of large-sized species can become constrained to relatively low trophic positions within a local community due to their high energetic demands combined with the limited efficiency with which energy is transferred up the food chain from primary producers. In a metacommunity context, dispersal can become a major driver of population dynamics and persistence, having also the potential to ameliorate the aforementioned energetic constraints due to its effect on colonization and energy subsidies from connected patches. Here, we derive a size-dependent model for food chain length in communities subjected to migration, and show that populations with higher influx of migrants are able to persist at higher trophic positions. Simulations of random, dendritic, and real aquatic metacommunities corroborate this result, and further indicate that community location in the landscape (relative centrality-isolation) may determine local food web structure. More central patches contained larger populations and were less constrained in trophic position. This effect was particularly strong in dendritic metacommunities, which are representative of freshwater watersheds in general. Furthermore, the role of spatial processes is nonlinearly intensified with increases in body size, indicating that larger organisms have a much stronger dependence on landscape attributes.The accepted manuscript in pdf format is listed with the files at the bottom of this page. The presentation of the authors' names and (or) special characters in the title of the manuscript may differ slightly between what is listed on this page and what is listed in the pdf file of the accepted manuscript; that in the pdf file of the accepted manuscript is what was submitted by the author

Economic valuation of the Emas waterfall, Mogi-Guaçu River, SP, Brazil

A Cachoeira de Emas, no Rio Mogi-Guaçu, é reconhecida regionalmente como um importante local para a pesca e o turismo. Os primeiros registros da pesca profissional e esportiva no local datam da década de 30, que é o mesmo período em que a atividade do turismo teve seu início. O presente artigo fornece uma valoração ambiental deste local e identifica as diferenças entre os principais grupos de pessoas que o frequentam. Durante o ano de 2006 nós entrevistamos 33 pescadores profissionais, 107 pescadores esportivos, 45 turistas e 103 excursionistas para estimar a Disposição a Pagar ( P) de cada categoria e para analisar a influência de fatores socioeconômicos através de regressões logísticas e ANCOVAs. A DAP dos pescadores profissionais foi significativamente influenciada pela idade e escolaridade e a DAP dos pescadores esportivos foi significativamente influenciada pela renda familiar. As variáveis que influenciaram a DAP dos turistas e excursionistas fora o sexo e a escolaridade. valor anual total agregado para manter a Cachoeira nas condições atuais foi estimado em US$81.080,00, e US$ 44.055.911,46 para recuperá-la.The Emas waterfall in Mogi-Guaçu River is regionally recognized as an important fishing spot and touristic place. The first reports of the professional and sport fishing there date back from the 30's, which is the same period when the tourism took place. The present paper provides an environmental valuation of this place and an assessment of the differences among the major groups of people using the area. During 2006 we interviewed 33 professional fishers, 107 sport fishers, 45 tourists and 103 excursionists in order to estimate the Willingness to Pay (WTP) for each category and to analyze the influence of socioeconomic factors by means of logistic regressions and ANCOVAs. The WTP of professional fisher was significantly influenced by age and education, and the WTP for the sport fishers was influenced by the family income. The variables that influenced the tourists' and excursionists' WTP were sex and education. The total annual aggregated value to maintain the waterfall in the current conditions was estimated in US$11.432.128, and US$ 55.424.283 to restore it

Trait Contributions to Fish Community Assembly Emerge From Trophic Interactions in an Individual-Based Model

Community ecology seeks to understand and predict the characteristics of communities that can develop under different environmental conditions, but most theory has been built on analytical models that are limited in the diversity of species traits that can be considered simultaneously. We address that limitation with an individual-based model to simulate assembly of fish communities characterized by life history and trophic interactions with multiple physiological tradeoffs as constraints on species performance. Simulation experiments were carried out to evaluate the distribution of 6 life history and 4 feeding traits along gradients of resource productivity and prey accessibility. These experiments revealed that traits differ greatly in importance for species sorting along the gradients. Body growth rate emerged as a key factor distinguishing community types and defining patterns of community stability and coexistence, followed by egg size and maximum body size. Dominance by fast-growing, relatively large, and fecund species occurred more frequently in cases where functional responses were saturated (i.e. high productivity and/or prey accessibility). Such dominance was associated with large biomass fluctuations and priority effects, which prevented richness from increasing with productivity and may have limited selection on secondary traits, such as spawning strategies and relative size at maturation. Our results illustrate that the distribution of species traits and the consequences for community dynamics are intimately linked and strictly dependent on how the benefits and costs of these traits are balanced across different conditions

Species-specific preferences drive the differential effects of lake factors on fish production

As the global human population grows, it remains a top priority for communities, managers, policymakers, and stakeholders to maintain healthy, sustainable, and productive fisheries under continued global change. Here we used a dataset consisting of fish and lake characteristics for 536 lakes across Ontario, Canada, to test whether multiple climate, human, and biological factors differentially affect fish production (i.e., population biomass per hectare per year). We tested the hypothesis that temperature is the key driver of fisheries production by testing for the effects of multiple factors on the production of three top predatory fish species: cold-water lake trout (Salvelinus namaycush), cool-water walleye (Sander vitreus), and warm-water smallmouth bass (Micropterus dolomieu). Using boosted regression tree analyses, we found that lake trout production was most influenced by the volume of hypolimnetic habitat, walleye production was related to other climatic variables, and smallmouth bass production was most influenced by sampling day of the year followed by Secchi depth. Our results suggest that current fish production models — that only include temperature and body size — may oversimplify important ecological complexities and thus misinform management decisions because species respond differently to environmental drivers.The accepted manuscript in pdf format is listed with the files at the bottom of this page. The presentation of the authors' names and (or) special characters in the title of the manuscript may differ slightly between what is listed on this page and what is listed in the pdf file of the accepted manuscript; that in the pdf file of the accepted manuscript is what was submitted by the author