MonALISA : A Distributed Monitoring Service Architecture

The MonALISA (Monitoring Agents in A Large Integrated Services Architecture) system provides a distributed monitoring service. MonALISA is based on a scalable Dynamic Distributed Services Architecture which is designed to meet the needs of physics collaborations for monitoring global Grid systems, and is implemented using JINI/JAVA and WSDL/SOAP technologies. The scalability of the system derives from the use of multithreaded Station Servers to host a variety of loosely coupled self-describing dynamic services, the ability of each service to register itself and then to be discovered and used by any other services, or clients that require such information, and the ability of all services and clients subscribing to a set of events (state changes) in the system to be notified automatically. The framework integrates several existing monitoring tools and procedures to collect parameters describing computational nodes, applications and network performance. It has built-in SNMP support and network-performance monitoring algorithms that enable it to monitor end-to-end network performance as well as the performance and state of site facilities in a Grid. MonALISA is currently running around the clock on the US CMS test Grid as well as an increasing number of other sites. It is also being used to monitor the performance and optimize the interconnections among the reflectors in the VRVS system.Comment: Talk from the 2003 Computing in High Energy and Nuclear Physics (CHEP03), La Jolla, Ca, USA, March 2003, 8 pages, pdf. PSN MOET00

Evolutionary 3D Image Segmentation of Curve Epithelial Tissues of Drosophila melanogaster

Analysing biological images coming from the microscope is challenging; not only is it complex to acquire the images, but also the three-dimensional shapes found on them. Thus, using automatic approaches that could learn and embrace that variance would be highly interesting for the field. Here, we use an evolutionary algorithm to obtain the 3D cell shape of curve epithelial tissues. Our approach is based on the application of a 3D segmentation algorithm called LimeSeg, which is a segmentation software that uses a particle-based active contour method. This program needs the fine-tuning of some hyperparameters that could present a long number of combinations, with the selection of the best parametrisation being highly time-consuming. Our evolutionary algorithm automatically selects the best possible parametrisation with which it can perform an accurate and non-supervised segmentation of 3D curved epithelial tissues. This way, we combine the segmentation potential of LimeSeg and optimise the parameters selection by adding automatisation. This methodology has been applied to three datasets of confocal images from Drosophila melanogaster, where a good convergence has been observed in the evaluation of the solutions. Our experimental results confirm the proper performing of the algorithm, whose segmented images have been compared to those manually obtained for the same tissues

Characterization of a branchial epithelial calcium channel (ECaC) in freshwater rainbow trout (Oncorhynchus mykiss)

The entry of calcium (Ca2+) through an apical membrane epithelial calcium channel (ECaC) is thought to a key step in piscine branchial Ca2+ uptake. In mammals, ECaC is a member of the transient receptor potential (TRP) gene family of which two sub-families have been identified, TRPV5 and TPRV6. In the present study we have identified a single rainbow trout (Oncorhynchus mykiss) ECaC (rtECaC) that is similar to the mammalian TRPV5 and TRPV6. Phylogenetic analysis of the protein sequence suggests that an ancestral form of the mammalian genes diverged from those in the lower vertebrates prior to the gene duplication event that gave rise to TRPV5 and TRPV6. The putative model for Ca2+ uptake in fish proposes that the mitochondria-rich cell (also termed ionocyte or chloride cell) is the predominant or exclusive site of transcellular Ca2+ movements owing to preferential localisation of ECaC to the apical membrane of these cells. However, the results of real-time PCR performed on enriched gill cell populations as well as immunocytochemistry and in situ hybridisation analysis of enriched cells, cell cultures and whole gill sections strongly suggest that ECaC is not exclusive to mitochondria-rich cells but that it is also found in pavement cells. Not only was ECaC protein localized to areas of the gill normally having few mitochondria-rich cells, but there was also no consistent co-localization of ECaC- and Na+/K+-ATPase-positive (a marker of mitochondria rich cells) cells. Taken together, the results of the present study suggest that although ECaC (mRNA and protein) does exist in trout gill, its cellular distribution is more extensive than previously thought, thus suggesting that Ca2+ uptake may not be restricted to mitochondria-rich cells as was proposed in previous models

Frequency Dependence of Quantum Localization in a Periodically Driven System

We study the quantum localization phenomena for a random matrix model belonging to the Gaussian orthogonal ensemble (GOE). An oscillating external field is applied on the system. After the transient time evolution, energy is saturated to various values depending on the frequencies. We investigate the frequency dependence of the saturated energy. This dependence cannot be explained by a naive picture of successive independent Landau-Zener transitions at avoided level crossing points. The effect of quantum interference is essential. We define the number of Floquet states which have large overlap with the initial state, and calculate its frequency dependence. The number of Floquet states shows approximately linear dependence on the frequency, when the frequency is small. Comparing the localization length in Floquet states and that in energy states from the viewpoint of the Anderson localization, we conclude that the Landau-Zener picture works for the local transition processes between levels.Comment: 12 pages and 6 figure

Report of the LHC Computing Grid Project. RTAG 12: Collaborative Tools

This document is the final report of the LHC Computing Grid (LCG) Project's Requirements and Technical Assessment Group (RTAG 12) on Collaborative Tools. It presents a summary of the requirements of the LHC collaborations for Collaborative Tools, assesses the current status of those tools in common use, discusses likely relevant future development, and provides recommendations for action by the LCG, the collaborations, and CERN for the immediate and long-term future. The requirements and assessments were assembled from formal and informal interactions between members of the RTAG, representatives of the LHC collaborations, CERN IT, and experts in the field of Collaborative Tools

Quantum Poincare Recurrences for Hydrogen Atom in a Microwave Field

We study the time dependence of the ionization probability of Rydberg atoms driven by a microwave field, both in classical and in quantum mechanics. The quantum survival probability follows the classical one up to the Heisenberg time and then decays algebraically as P(t) ~ 1/t. This decay law derives from the exponentially long times required to escape from some region of the phase space, due to tunneling and localization effects. We also provide parameter values which should allow to observe such decay in laboratory experiments.Comment: revtex, 4 pages, 4 figure

The effect of excess dietary manganese on uninfected and Ascaridia galli infected chicks

Abstract The effect of dietary manganese from two different sources on chicks (uninfected and infected with Ascaridia galli) was studied

The Fermi accelerator in atom optics

We study the classical and quantum dynamics of a Fermi accelerator realized by an atom bouncing off a modulated atomic mirror. We find that in a window of the modulation amplitude dynamical localization occurs in both position and momentum. A recent experiment [A. Steane, P. Szriftgiser, P. Desbiolles, and J. Dalibard, Phys. Rev. Lett. {\bf 74}, 4972 (1995)] shows that this system can be implemented experimentally.Comment: 5 pages, 5 figure