7,542 research outputs found

    Tissue-specific DNase I-hypersensitive sites in the 5ÂŽflanking sequences of the trytophane oxygenase and tyrosine aminotransferase genes

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    The genes for tryptophan oxygenase (TO) and tyrosine aminotransferase (TAT) are expressed in a tissue- and development-specific manner and are regulated by glucocorticoids (TO and TAT) and glucagon or its intracellular mediator cAMP (TAT) in rat liver. We have analyzed the chromatin structure of these genes in the vicinity of the 5' ends with regard to DNaseI hypersensitivity and have found DNaseI hypersensitive sites upstream of each of the promoters. Mapping of this region reveals three closely spaced cleavage sites near the TO promoter and a doublet of sites near the TAT promoter. In both genes additional cleavage sites are found further upstream. All hypersensitive sites of both genes are absent in kidney nuclei and therefore appear to be specific for the tissue expressing the genes. A correlation of expression and modified chromatin structure was also observed in a hepatoma cell line expressing TAT but not TO: hypersensitive sites are present in TAT but not in TO chromatin. Upon glucocorticoid induction an additional hypersensitive site is detected approximately 2 kb upstream of the TAT promoter in liver and hepatoma cells

    Footprinting of DNA-binding proteins in intact cells

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    Process model based development of disassembly tools

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    Dieser Beitrag ist mit Zustimmung des Rechteinhabers aufgrund einer (DFG geförderten) Allianz- bzw. Nationallizenz frei zugĂ€nglich.This publication is with permission of the rights owner freely accessible due to an Alliance licence and a national licence (funded by the DFG, German Research Foundation) respectively.Disassembly processes require flexible tools for loosening and handling operations. Today, disassembly processes demand a great deal of manual labour and a vast variety of tools. Partly destructive tools which generate and use new acting surfaces are able to increase the economic viability owing to their flexibility and their promotion of the reuse of components. This article describes selected methods of acting surface generation and their application for prototypical tools.DFG, SFB 281, Demontagefabriken zur RĂŒckgewinnung von Ressourcen in Produkt- und MaterialkreislĂ€ufe

    Tunable Dipolar Capillary Deformations for Magnetic Janus Particles at Fluid-Fluid Interfaces

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    Janus particles have attracted significant interest as building blocks for complex materials in recent years. Furthermore, capillary interactions have been identified as a promising tool for directed self-assembly of particles at fluid-fluid interfaces. In this paper, we develop theoretical models describing the behaviour of magnetic Janus particles adsorbed at fluid-fluid interfaces interacting with an external magnetic field. Using numerical simulations, we test the models predictions and show that the magnetic Janus particles deform the interface in a dipolar manner. We suggest how to utilise the resulting dipolar capillary interactions to assemble particles at a fluid-fluid interface, and further demonstrate that the strength of these interactions can be tuned by altering the external field strength, opening up the possibility to create novel, reconfigurable materials.Comment: 9 pages, 7 figure

    Full-field structured-illumination super-resolution X-ray transmission microscopy

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    Modern transmission X-ray microscopy techniques provide very high resolution at low and medium X-ray energies, but suffer from a limited field-of-view. If sub-micrometre resolution is desired, their field-of-view is typically limited to less than one millimetre. Although the field-of-view increases through combining multiple images from adjacent regions of the specimen, so does the required data acquisition time. Here, we present a method for fast full-field super-resolution transmission microscopy by structured illumination of the specimen. This technique is well-suited even for hard X-ray energies above 30 keV, where efficient optics are hard to obtain. Accordingly, investigation of optically thick specimen becomes possible with our method combining a wide field-of-view spanning multiple millimetres, or even centimetres, with sub-micron resolution and hard X-ray energies

    Characterisation of two alcohol acyltransferases from kiwifruit (Actinidia spp.) reveals distinct substrate preferences.

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    Volatile esters are key compounds of kiwifruit flavour and are formed by alcohol acyltransferases that belong to the BAHD acyltransferase superfamily. Quantitative RT-PCR was used to screen kiwifruitderived expressed sequence tags with proposed acyltransferase function in order to select ripeningspecific sequences and test their involvement in alcohol acylation. The screening criterion was for at least 10-fold increased transcript accumulation in ripe compared with unripe kiwifruit and in response to ethylene. Recombinant expression in yeast revealed alcohol acyltransferase activity for Actinidia-derived AT1, AT16 and the phylogenetically distinct AT9, using various alcohol and acyl-CoA substrates. Functional characterisation of AT16 and AT9 demonstrated striking differences in their substrate preferences and apparent catalytic efficiencies Ă°V0 max Kïżœ1 m Þ. Thus revealing benzoyl-CoA:alcohol O-acyltransferase activity for AT16 and acetyl-CoA:alcohol O-acyltransferase activity for AT9. Both kiwifruit-derived enzymes displayed higher reaction rates with butanol compared with ethanol, even though ethanol is the main alcohol in ripe fruit. Since ethyl acetate and ethyl benzoate are major esters in ripe kiwifruit, we suggest that fruit characteristic volatile profiles result from a combination of substrate availability and specificity of individual alcohol acyltransferases
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