3,099 research outputs found
Localizing Peace: An Agenda for Sustainable Peacebuilding
The sophistication of peace operations and complex humanitarian missions has increased in recent decades, resulting in increased international capacity to mitigate organized violence and provide relief to suffering populations. With respect to other indicators of success, however, international peace strategies still leave much to be desired. By their very nature, externally driven efforts tend to leave local actors feeling marginalized and disempowered, and unable to fulfill aspirations for cumulative and sustainable transformations in the quality of life. The peace that local populations genuinely hope for may fail to take root, and dynamics associated with interventionism may replace one set of problems with another. To address such problems within existing peace processes and to provide a framework for broader preventive action, this paper identifies “localizing peace” as a central challenge for twenty-first century peacebuilding efforts. International and cross-cultural cooperation remain vital for tackling border-spanning problems and structural inequalities, yet the advancement of global peace depends in no small part on the enhancement of local peace capacities. Ultimately, peace must be defined and constructed locally, and peacebuilding efforts become energetic and sustainable only to the extent that they tap local resources, empower local constituencies, and achieve legitimacy within particular cultural and religious contexts. By appreciating these realities, international actors can discover more effective means of partnering with local organizations and movements, while also deriving new insights into the unity and diversity of peacemaking
The Role of Faith in Cross-Cultural Conflict Resolution
Excerpt
When we speak of the role of faith in cross-cultural conflict resolution, our challenge is to honor the diversity of the world’s humanistic and spiritual traditions while seeking common ground among them. What we aspire towards, in other words, is an agenda for research, dialogue and activism that is global in conception and responsive to common challenges of peacemaking and coexistence within and among the world’s many traditions. It is no longer sufficient for transnational peace agendas to be defined primarily by the cultural experiences and perceived security threats of a particular nation or culture. We need new frameworks for organizing knowledge about religion, culture and spirituality – frameworks that recognize the powerful role that faith and belief play in conflict and conflict resolution, and that do not privilege one culture as ‘normal’ and label another as ‘exceptional’
iREAD: a tool for intron retention detection from RNA-seq data.
BACKGROUND: Intron retention (IR) has been traditionally overlooked as \u27noise\u27 and received negligible attention in the field of gene expression analysis. In recent years, IR has become an emerging field for interrogating transcriptomes because it has been recognized to carry out important biological functions such as gene expression regulation and it has been found to be associated with complex diseases such as cancers. However, methods for detecting IR today are limited. Thus, there is a need to develop novel methods to improve IR detection.
RESULTS: Here we present iREAD (intron REtention Analysis and Detector), a tool to detect IR events genome-wide from high-throughput RNA-seq data. The command line interface for iREAD is implemented in Python. iREAD takes as input a BAM file, representing the transcriptome, and a text file containing the intron coordinates of a genome. It then 1) counts all reads that overlap intron regions, 2) detects IR events by analyzing the features of reads such as depth and distribution patterns, and 3) outputs a list of retained introns into a tab-delimited text file. iREAD provides significant added value in detecting IR compared with output from IRFinder with a higher AUC on all datasets tested. Both methods showed low false positive rates and high false negative rates in different regimes, indicating that use together is generally beneficial. The output from iREAD can be directly used for further exploratory analysis such as differential intron expression and functional enrichment. The software is freely available at https://github.com/genemine/iread.
CONCLUSION: Being complementary to existing tools, iREAD provides a new and generic tool to interrogate poly-A enriched transcriptomic data of intron regions. Intron retention analysis provides a complementary approach for understanding transcriptome
The Flavor Asymmetry of the Light Quark Sea from Semi-inclusive Deep-inelastic Scattering
The flavor asymmetry of the light quark sea of the nucleon is determined in
the kinematic range 0.02<x<0.3 and 1 GeV^2<Q^2<10 GeV^2, for the first time
from semi-inclusive deep-inelastic scattering. The quantity
(dbar(x)-ubar(x))/(u(x)-d(x)) is derived from a relationship between the yields
of positive and negative pions from unpolarized hydrogen and deuterium targets.
The flavor asymmetry dbar-ubar is found to be non-zero and x dependent, showing
an excess of dbar over ubar quarks in the proton.Comment: 7 Pages, 2 figures, RevTeX format; slight revision in text, small
change in extraction of dbar-ubar and comparison with a high q2
parameterizatio
Observation of a Single-Spin Azimuthal Asymmetry in Semi-Inclusive Pion Electro-Production
Single-spin asymmetries for semi-inclusive pion production in deep-inelastic
scattering have been measured for the first time. A significant target-spin
asymmetry of the distribution in the azimuthal angle phi of the pion relative
to the lepton scattering plane was observed for pi+ electro-production on a
longitudinally polarized hydrogen target. The corresponding analyzing power in
the sin(phi) moment of the cross section is 0.022 +/- 0.005 +/- 0.003. This
result can be interpreted as the effect of terms in the cross section involving
chiral-odd spin distribution functions in combination with a time-reversal-odd
fragmentation function that is sensitive to the transverse polarization of the
fragmenting quark.Comment: 5 pages of RevTex, 3 ps figures, 2 table
Observation of a Coherence Length Effect in Exclusive Rho^0 Electroproduction
Exclusive incoherent electroproduction of the rho^0(770) meson from 1H, 2H,
3He, and 14N targets has been studied by the HERMES experiment at squared
four-momentum transfer Q**2>0.4 GeV**2 and positron energy loss nu from 9 to 20
GeV. The ratio of the 14N to 1H cross sections per nucleon, known as the
nuclear transparency, was found to decrease with increasing coherence length of
quark-antiquark fluctuations of the virtual photon. The data provide clear
evidence of the interaction of the quark- antiquark fluctuations with the
nuclear medium.Comment: RevTeX, 5 pages, 3 figure
Determination of the Deep Inelastic Contribution to the Generalised Gerasimov-Drell-Hearn Integral for the Proton and Neutron
The virtual photon absorption cross section differences [sigma_1/2-sigma_3/2]
for the proton and neutron have been determined from measurements of polarised
cross section asymmetries in deep inelastic scattering of 27.5 GeV
longitudinally polarised positrons from polarised 1H and 3He internal gas
targets. The data were collected in the region above the nucleon resonances in
the kinematic range nu < 23.5 GeV and 0.8 GeV**2 < Q**2 < 12 GeV**2. For the
proton the contribution to the generalised Gerasimov-Drell-Hearn integral was
found to be substantial and must be included for an accurate determination of
the full integral. Furthermore the data are consistent with a QCD
next-to-leading order fit based on previous deep inelastic scattering data.
Therefore higher twist effects do not appear significant.Comment: 6 pages, 3 figures, 1 table, revte
Measurement of Angular Distributions and R= sigma_L/sigma_T in Diffractive Electroproduction of rho^0 Mesons
Production and decay angular distributions were extracted from measurements
of exclusive electroproduction of the rho^0(770) meson over a range in the
virtual photon negative four-momentum squared 0.5< Q^2 <4 GeV^2 and the
photon-nucleon invariant mass range 3.8< W <6.5 GeV. The experiment was
performed with the HERMES spectrometer, using a longitudinally polarized
positron beam and a ^3He gas target internal to the HERA e^{+-} storage ring.
The event sample combines rho^0 mesons produced incoherently off individual
nucleons and coherently off the nucleus as a whole. The distributions in one
production angle and two angles describing the rho^0 -> pi+ pi- decay yielded
measurements of eight elements of the spin-density matrix, including one that
had not been measured before. The results are consistent with the dominance of
helicity-conserving amplitudes and natural parity exchange. The improved
precision achieved at 47 GeV,
reveals evidence for an energy dependence in the ratio R of the longitudinal to
transverse cross sections at constant Q^2.Comment: 15 pages, 15 embedded figures, LaTeX for SVJour(epj) document class
Revision: Fig. 15 corrected, recent data added to Figs. 10,12,14,15; minor
changes to tex
Beam-Induced Nuclear Depolarisation in a Gaseous Polarised Hydrogen Target
Spin-polarised atomic hydrogen is used as a gaseous polarised proton target
in high energy and nuclear physics experiments operating with internal beams in
storage rings. When such beams are intense and bunched, this type of target can
be depolarised by a resonant interaction with the transient magnetic field
generated by the beam bunches. This effect has been studied with the HERA
positron beam in the HERMES experiment at DESY. Resonances have been observed
and a simple analytic model has been used to explain their shape and position.
Operating conditions for the experiment have been found where there is no
significant target depolarisation due to this effect.Comment: REVTEX, 6 pages, 5 figure
Measurement of Longitudinal Spin Transfer to Lambda Hyperons in Deep-Inelastic Lepton Scattering
Spin transfer in deep-inelastic Lambda electroproduction has been studied
with the HERMES detector using the 27.6 GeV polarized positron beam in the HERA
storage ring. For an average fractional energy transfer = 0.45, the
longitudinal spin transfer from the virtual photon to the Lambda has been
extracted. The spin transfer along the Lambda momentum direction is found to be
0.11 +/- 0.17 (stat) +/- 0.03 (sys); similar values are found for other
possible choices for the longitudinal spin direction of the Lambda. This result
is the most precise value obtained to date from deep-inelastic scattering with
charged lepton beams, and is sensitive to polarized up quark fragmentation to
hyperon states. The experimental result is found to be in general agreement
with various models of the Lambda spin content, and is consistent with the
assumption of helicity conservation in the fragmentation process.Comment: 8 pages, 3 figures; new version has an expanded discussion and small
format change
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