86 research outputs found

    E-CORE: Emotion Correlation Enhanced Empathetic Dialogue Generation

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    Achieving empathy is a crucial step toward humanized dialogue systems. Current approaches for empathetic dialogue generation mainly perceive an emotional label to generate an empathetic response conditioned on it, which simply treat emotions independently, but ignore the intrinsic emotion correlation in dialogues, resulting in inaccurate emotion perception and unsuitable response generation. In this paper, we propose a novel emotion correlation enhanced empathetic dialogue generation framework, which comprehensively realizes emotion correlation learning, utilization, and supervising. Specifically, a multi-resolution emotion graph is devised to capture context-based emotion interactions from different resolutions, further modeling emotion correlation. Then we propose an emotion correlation enhanced decoder, with a novel correlation-aware aggregation and soft/hard strategy, respectively improving the emotion perception and response generation. Experimental results on the benchmark dataset demonstrate the superiority of our model in both empathetic perception and expression.Comment: 19 pages, 6 figure

    Differential microRNA expression between shoots and rhizomes in Oryza longistaminata using high-throughput RNA sequencing

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    AbstractPlant microRNAs (miRNAs) play important roles in biological processes such as development and stress responses. Although the diverse functions of miRNAs in model organisms have been well studied, their function in wild rice is poorly understood. In this study, high-throughput small RNA sequencing was performed to characterize tissue-specific transcriptomes in Oryza longistaminata. A total of 603 miRNAs, 380 known rice miRNAs, 72 conserved plant miRNAs, and 151 predicted novel miRNAs were identified as being expressed in aerial shoots and rhizomes. Additionally, 99 and 79 miRNAs were expressed exclusively or differentially, respectively, in the two tissues, and 144 potential targets were predicted for the differentially expressed miRNAs in the rhizomes. Functional annotation of these targets suggested that transcription factors, including squamosa promoter binding proteins and auxin response factors, function in rhizome growth and development. The expression levels of several miRNAs and target genes in the rhizomes were quantified by RT-PCR, and the results indicated the existence of complex regulatory mechanisms between the miRNAs and their targets. Eight target cleavage sites were verified by RNA ligase-mediated rapid 5′ end amplification. These results provide valuable information on the composition, expression and function of miRNAs in O. longistaminata, and will aid in understanding the molecular mechanisms of rhizome development

    Identification of rhizome-specific genes by genome-wide differential expression Analysis in Oryza longistaminata

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    <p>Abstract</p> <p>Background</p> <p>Rhizomatousness is a key component of perenniality of many grasses that contribute to competitiveness and invasiveness of many noxious grass weeds, but can potentially be used to develop perennial cereal crops for sustainable farmers in hilly areas of tropical Asia. <it>Oryza longistaminata</it>, a perennial wild rice with strong rhizomes, has been used as the model species for genetic and molecular dissection of rhizome development and in breeding efforts to transfer rhizome-related traits into annual rice species. In this study, an effort was taken to get insights into the genes and molecular mechanisms underlying the rhizomatous trait in <it>O. longistaminata </it>by comparative analysis of the genome-wide tissue-specific gene expression patterns of five different tissues of <it>O. longistaminata </it>using the Affymetrix GeneChip Rice Genome Array.</p> <p>Results</p> <p>A total of 2,566 tissue-specific genes were identified in five different tissues of <it>O. longistaminata</it>, including 58 and 61 unique genes that were specifically expressed in the rhizome tips (RT) and internodes (RI), respectively. In addition, 162 genes were up-regulated and 261 genes were down-regulated in RT compared to the shoot tips. Six distinct <it>cis</it>-regulatory elements (CGACG, GCCGCC, GAGAC, AACGG, CATGCA, and TAAAG) were found to be significantly more abundant in the promoter regions of genes differentially expressed in RT than in the promoter regions of genes uniformly expressed in all other tissues. Many of the RT and/or RI specifically or differentially expressed genes were located in the QTL regions associated with rhizome expression, rhizome abundance and rhizome growth-related traits in <it>O. longistaminata </it>and thus are good candidate genes for these QTLs.</p> <p>Conclusion</p> <p>The initiation and development of the rhizomatous trait in <it>O. longistaminata </it>are controlled by very complex gene networks involving several plant hormones and regulatory genes, different members of gene families showing tissue specificity and their regulated pathways. Auxin/IAA appears to act as a negative regulator in rhizome development, while GA acts as the activator in rhizome development. Co-localization of the genes specifically expressed in rhizome tips and rhizome internodes with the QTLs for rhizome traits identified a large set of candidate genes for rhizome initiation and development in rice for further confirmation.</p

    Handwriting velcro: Endowing AR glasses with personalized and posture-adaptive text input using flexible touch sensor

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    Text input is a desired feature for AR glasses. While there already exist various input modalities (e.g., voice, mid-air gesture), the diverse demands required by different input scenarios can hardly be met by the small number of fixed input postures offered by existing solutions. In this paper, we present Handwriting Velcro, a novel text input solution for AR glasses based on flexible touch sensors. The distinct advantage of our system is that it can easily stick to different body parts, thus endowing AR glasses with posture-adaptive handwriting input. We explored the design space of on-body device positions and identified the best interaction positions for various user postures. To flatten users' learning curves, we adapt our device to the established writing habits of different users by training a 36-character (i.e., A-Z, 0-9) recognition neural network in a human-in-the-loop manner. Such a personalization attempt ultimately achieves a low error rate of 0.005 on average for users with different writing styles. Subjective feedback shows that our solution has a good performance in system practicability and social acceptance. Empirically, we conducted a heuristic study to explore and identify the best interaction Position-Posture Correlation. Experimental results show that our Handwriting Velcro excels similar work [6] and commercial product in both practicality (12.3 WPM) and user-friendliness in different contexts

    Sca-1+ cardiac fibroblasts promote development of heart failure

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    The causative effect of GM-CSF produced by cardiac fibroblasts to development of heart failure has not been shown. We identified the pathological GM-CSF-producing cardiac fibroblast subset and the specific deletion of IL-17A signaling to these cells attenuated cardiac inflammation and heart failure. We describe here the CD45−CD31−CD29+mEFSK4+PDGFRα+Sca-1+periostin+ (Sca-1+) cardiac fibroblast subset as the main GM-CSF producer in both experimental autoimmune myocarditis and myocardial infarction mouse models. Specific ablation of IL-17A signaling to Sca-1+periostin+ cardiac fibroblasts (PostnCreIl17rafl/fl) protected mice from post-infarct heart failure and death. Moreover, PostnCreIl17rafl/fl mice had significantly fewer GM-CSF-producing Sca-1+ cardiac fibrob-lasts and inflammatory Ly6Chi monocytes in the heart. Sca-1+ cardiac fibroblasts were not only potent GM-CSF producers, but also exhibited plasticity and switched their cytokine production profiles depending on local microenvironments. Moreover, we also found GMCSF-positive cardiac fibroblasts in cardiac biopsy samples from heart failure patients of myocarditis or ischemic origin. Thus, this is the first identification of a pathological GMCSF-producing cardiac fibroblast subset in human and mice hearts with myocarditis and ischemic cardiomyopathy. Sca-1+ cardiac fibroblasts direct the type of immune cells infiltrating the heart during cardiac inflammation and drive the development of heart failure

    Fractal dimension-based analysis of rockery contour morphological characteristics for Chinese classical gardens south of the Yangtze River

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    Based on the rockery photos of 10 classical gardens including world cultural heritage, this paper incorporates the combined analysis and comparison of constituent elements (rockeries, buildings and plants) of scenic surfaces, and probes into the fractal characteristics of landscaping through the theory and the fractal dimension (FD) value analysis software. Studies have shown that the quantitative evaluation data of visual complexity (FD, i.e., fractal dimension) can characterize the contour morphology of constituent elements of the scenic surface of rockeries. The relevant analysis results are as follows: (1) FD can directly quantify the morphological contour of each element. Through the statistical analysis, it can effectively avoid the misjudgment of empirical cognition and subjective feeling. Therefore, FD value can be used as one of the effective indexes to evaluate the complexity and diversity of rockery and landscape elements. (2) The change in the level of the FD value enables the intuitive analysis of the effects of the plant varieties and landscaping techniques on rockery morphological complexity. (3) Higher FD value is not always better. Necessary morphological maintenance is required to avoid excessive FD value of plants

    Characterization of Transcription Factor Gene OsDRAP1 Conferring Drought Tolerance in Rice

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    HIGHLIGHTSOverexpressing and RNA interfering OsDRAP1 transgenic rice plants exhibited significantly improved and reduced drought tolerance, but accompanied with negative effects on development and yield.The dehydration responsive element binding (DREBs) genes are important transcription factors which play a crucial role in plant abiotic stress tolerances. In this study, we functionally characterized a DREB2-like gene, OsDRAP1 conferring drought tolerance (DT) in rice. OsDRAP1, containing many cis-elements in its promoter region, was expressed in all organs (mainly expressed in vascular tissues) of rice, and induced by a variety of environmental stresses and plant hormones. Overexpressing OsDRAP1 transgenic plants exhibited significantly improved DT; while OsDRAP1 RNA interfering plants exhibited significantly reduced DT which also accompanied with significant negative effects on development and yield. Overexpression of OsDRAP1 has a positive impact on maintaining water balance, redox homeostasis and vascular development in transgenic rice plants under drought stress. OsDRAP1 interacted with many genes/proteins and could activate many downstream DT related genes, including important transcription factors such as OsCBSX3 to response drought stress, indicating the OsDRAP1-mediated pathways for DT involve complex genes networks. All these results provide a basis for further complete understanding of the OsDRAP1 mediated gene networks and their related phenotypic effects

    Chromatin remodeling and nucleoskeleton synergistically control osteogenic differentiation in different matrix stiffnesses

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    Matrix stiffness plays an important role in determining cell differentiation. The expression of cell differentiation-associated genes can be regulated by chromatin remodeling-mediated DNA accessibility. However, the effect of matrix stiffness on DNA accessibility and its significance for cell differentiation have not been investigated. In this study, gelatin methacryloyl (GelMA) hydrogels with different degrees of substitution were used to simulate soft, medium, and stiff matrices, and it was found that a stiff matrix promoted osteogenic differentiation of MC3T3-E1 cells by activating the Wnt pathway. In the soft matrix, the acetylation level of histones in cells was decreased, and chromatin condensed into a closed conformation, affecting the activation of β-catenin target genes (Axin2, c-Myc). Histone deacetylase inhibitor (TSA) was used to decondense chromatin. However, there was no significant increase in the expression of β-catenin target genes and the osteogenic protein Runx2. Further studies revealed that β-catenin was restricted to the cytoplasm due to the downregulation of lamin A/C in the soft matrix. Overexpression of lamin A/C and concomitant treatment of cells with TSA successfully activated β-catenin/Wnt signaling in cells in the soft matrix. The results of this innovative study revealed that matrix stiffness regulates cell osteogenic differentiation through multiple pathways, which involve complex interactions between transcription factors, epigenetic modifications of histones, and the nucleoskeleton. This trio is critical for the future design of bionic extracellular matrix biomaterials
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