Precision Masses of the low-mass binary system GJ 623

We have used Aperture Masking Interferometry and Adaptive Optics (AO) at the Palomar 200'' to obtain precise mass measurements of the binary M dwarf GJ 623. AO observations spread over 3 years combined with a decade of radial velocity measurements constrain all orbital parameters of the GJ 623 binary system accurately enough to critically challenge the models. The dynamical masses measured are m_{1}=0.371\pm0.015 M_{\sun} (4%) and m_{2}=0.115\pm0.0023 M_{\sun} (2%) for the primary and the secondary respectively. Models are not consistent with color and mass, requiring very low metallicities.Comment: 7 pages, 5 figures. Accepted for Ap

The Approach to Ergodicity in Monte Carlo Simulations

The approach to the ergodic limit in Monte Carlo simulations is studied using both analytic and numerical methods. With the help of a stochastic model, a metric is defined that enables the examination of a simulation in both the ergodic and non-ergodic regimes. In the non-ergodic regime, the model implies how the simulation is expected to approach ergodic behavior analytically, and the analytically inferred decay law of the metric allows the monitoring of the onset of ergodic behavior. The metric is related to previously defined measures developed for molecular dynamics simulations, and the metric enables the comparison of the relative efficiencies of different Monte Carlo schemes. Applications to Lennard-Jones 13-particle clusters are shown to match the model for Metropolis, J-walking and parallel tempering based approaches. The relative efficiencies of these three Monte Carlo approaches are compared, and the decay law is shown to be useful in determining needed high temperature parameters in parallel tempering and J-walking studies of atomic clusters.Comment: 17 Pages, 7 Figure

Inherent-Structure Dynamics and Diffusion in Liquids

The self-diffusion constant D is expressed in terms of transitions among the local minima of the potential (inherent structure, IS) and their correlations. The formulae are evaluated and tested against simulation in the supercooled, unit-density Lennard-Jones liquid. The approximation of uncorrelated IS-transition (IST) vectors, D_{0}, greatly exceeds D in the upper temperature range, but merges with simulation at reduced T ~ 0.50. Since uncorrelated IST are associated with a hopping mechanism, the condition D ~ D_{0} provides a new way to identify the crossover to hopping. The results suggest that theories of diffusion in deeply supercooled liquids may be based on weakly correlated IST.Comment: submitted to PR

Relevance of baseline hard proton-proton spectra for high-energy nucleus-nucleus physics

We discuss three different cases of hard inclusive spectra in proton-proton collisions: high $p_T$ single hadron production at $\sqrt{s}\approx$ 20 GeV and at $\sqrt{s}$ = 62.4 GeV, and direct photon production at $\sqrt{s}$ = 200 GeV; with regard to their relevance for the search of Quark Gluon Plasma signals in A+A collisions at SPS and RHIC energies.Comment: Proceeds. Hot Quarks 2004 Int. Workshop on the Physics of Ultrarelativistic Nucleus-Nucleus Collisions. 26 pages. 26 figs. [minor corrs., refs. added

The Potential Energy Landscape and Mechanisms of Diffusion in Liquids

The mechanism of diffusion in supercooled liquids is investigated from the potential energy landscape point of view, with emphasis on the crossover from high- to low-T dynamics. Molecular dynamics simulations with a time dependent mapping to the associated local mininum or inherent structure (IS) are performed on unit-density Lennard-Jones (LJ). New dynamical quantities introduced include r2_{is}(t), the mean-square displacement (MSD) within a basin of attraction of an IS, R2(t), the MSD of the IS itself, and g_{loc}(t) the mean waiting time in a cooperative region. At intermediate T, r2_{is}(t) posesses an interval of linear t-dependence allowing calculation of an intrabasin diffusion constant D_{is}. Near T_{c} diffusion is intrabasin dominated with D = D_{is}. Below T_{c} the local waiting time tau_{loc} exceeds the time, tau_{pl}, needed for the system to explore the basin, indicating the action of barriers. The distinction between motion among the IS below T_{c} and saddle, or border dynamics above T_{c} is discussed.Comment: submitted to pr

The Vector Probe in Heavy-Ion Reactions

We review essential elements in using the $J^P=1^-$ channel as a probe for hot and dense matter as produced in (ultra-) relativistic collisions of heavy nuclei. The uniqueness of the vector channel resides in the fact that it directly couples to photons, both real and virtual (dileptons), enabling the study of thermal radiation and in-medium effects on both light ($\rho, \omega, \phi$) and heavy ($\Psi, \Upsilon$) vector mesons. We emphasize the importance of interrelations between photons and dileptons, and characterize relevant energy/mass regimes through connections to Quark-Gluon-Plasma emission and chiral symmetry restoration. Based on critical analysis of our current understanding of data from fixed-target energies, we identify open key questions to be addressed.Comment: Invited Talk at the Hot Quarks 2004 Workshop, July 18-24, 2004 (Taos Valley, NM, USA), 15 pages latex incl 14 figs and iop style files, to appear in the proceeding

Dissect: detection and characterization of novel structural alterations in transcribed sequences

Motivation: Computational identification of genomic structural variants via high-throughput sequencing is an important problem for which a number of highly sophisticated solutions have been recently developed. With the advent of high-throughput transcriptome sequencing (RNA-Seq), the problem of identifying structural alterations in the transcriptome is now attracting significant attention