Design of a dedicated circular coil for Magnetic Resonance Spectroscopy studies in small phantoms and animal acquisition with a 3 Tesla Magnetic Resonance clinical scanner

Abstract Introduction: Magnetic Resonance Spectroscopy (MRS) is a very powerful tool to explore the tissue components, by allowing a selective identification of molecules and molecular distribution mapping. Due to intrinsic Signal-to-Noise Ratio limitations (SNR), MRS in small phantoms and animals with a clinical scanner requires the design and development of dedicated radiofrequency (RF) coils, a task of fundamental importance. In this article, the authors describe the simulation, design, and application of a 1H transmit/receive circular coil suitable for MRS studies in small phantoms and small animal models with a clinical 3T scanner. In particular, the circular coil could be an improvement in animal experiments for tumor studies in which the lesions are localized in specific areas. Material and methods: The magnetic field pattern was calculated using the Biot–Savart law and the inductance was evaluated with analytical calculations. Finally, the coil sensitivity was measured with the perturbing sphere method. Successively, a prototype of the coil was built and tested on the workbench and by the acquisition of MRS data. Results: In this work, we demonstrate the design trade-offs for successfully developing a dedicated coil for MRS experiments in small phantoms and animals with a clinical scanner. The coil designed in the study offers the potential for obtaining MRS data with a high SNR and good spectral resolution. Conclusions: The paper provides details of the design, modelling, and construction of a dedicated circular coil, which represents a low cost and easy to build answer for MRS experiments in small samples with a clinical scanner

A Practical Guide to Estimating Coil Inductance for Magnetic Resonance Applications

Radiofrequency (RF) coils are employed to transmit and/or receive signals in Magnetic Resonance (MR) systems. The design of home-made, organ-specific RF coils with optimized homogeneity and/or Signal-to-Noise Ratio (SNR) can be a plus in many research projects. The first step requires accurate inductance calculation, this depending on the conductor's geometry, to later define the tuning capacitor necessary to obtain the desired resonance frequency. To fulfil such a need it is very useful to perform a priori inductance estimation rather than relying on the time-consuming trial-and-error approach. This paper describes and compares two different procedures for coil inductance estimation to allow for a fast coil-prototyping process. The first method, based on calculations in the quasi-static approximation, permits an investigation on how the cross-sectional geometry of the RF coil conductors affects the total inductance and can be easily computed for a wide variety of coil geometries. The second approach uses a numerical full-wave method based on the Finite-Difference Time-Domain (FDTD) algorithm, and permits the simulation of RF coils with any complex geometry, including the case of multi-element phased array. Comparison with workbench measurements validates both the analytical and numerical results for RF coils operating within a wide field range (0.18–7 T)

Simulation, design, and test of an elliptical surface coil for magnetic resonance imaging and spectroscopy

AbstractThe simplest design of surface coils for magnetic resonance imaging (MRI) applications is circular and square loops, both producing a magnetic field perpendicular to the coil plane in the central region‐of‐interest (ROI), with an amplitude that decreases along the coil axis. However, a surface coil constituted by a loop with different geometry could be necessary when particular field‐of‐views (FOVs) are desired, especially for performing imaging in an elongated region. This can be achieved by using an elliptical loop, which can guarantee a wide longitudinal FOV and a good penetration in deep sample regions. This work proposes the application of a method for elliptical coil Signal‐to‐Noise Ratio (SNR) estimation previously developed for circular and square loop design, in which coil inductance and resistance are analytically calculated and the magnetic field pattern is estimated using the magnetostatic approach, while the sample‐induced resistance is calculated with the vector potential calculation method. In the second part of the paper, we propose the simulation and the design of a transmit/receive elliptical coil for MRI in mice with a 3T clinical scanner. We also evaluated the coil performance in a preliminary magnetic resonance spectroscopy (MRS) study in phantom

Simulation and comparison of coils for Hyperpolarized 13C MRS cardiac metabolism studies in pigs

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Detection of 3D Cardiac metabolism after injection of hyperpolarized [1-13C]pyruvate

Introduction MRI with hyperpolarised 13C represents a promising modality for in-vivo spectroscopy and provides a unique opportunity for non-invasive assessment of cardiac regional metabolism. Purpose We present a method based on a volumetric IDEAL spiral CSI acquisition for obtaining spatial information on the metabolism of the whole heart after intravenous injection of hyperpolarized [1-13C]pyruvate in a large animal model with a clinical 3T scanner. Methods Three healthy male mini-pigs (38±2 kg) were maintained under deep sedation; a dose of 20 mL of 230 mM [1-13C]pyruvate was administered over about 10 s by manual injection. Animal experiments were performed on a 3T GE Signa HDx scanner with a 13C quadrature birdcage coil. [1-13C]pyruvate was polarized using a HyperSense DNP polariser with subsequent dissolution. The final injection solution contained 230 mM sodium [1-13C]pyruvate, 100 mM TRIS buffer, 0.27 mM Na2EDTA and 20 μM Dotarem with T≈37°C and pH ≈ 7.6. Anatomical reference images were acquired in the axial plane with standard FIESTA sequence (body coil FOV=30x30 cm2, FA=20°, TE/TR=3.8ms/7.52ms, matrix 224x160, slice thickness 5 mm, 20 slices). Metabolic information covering the heart were obtained using a 3D IDEAL spiral CSI prescribed on the same region imaged by the reference anatomical sequence (FOV= 30x30 cm, slab thickness=100mm) starting 20 seconds after the beginning of the hyperpolarized [113C]-pyruvate injection. The IDEAL spiral CSI concept was implemented into a multi-slice, pulse-and-acquire sequence with a 2D spiral readout and phase encoding along the third dimension. A constant echo time shift of TE=0.9ms, 11 encoding steps and FA=7° were used to optimize the study for the considered frequencies. The data was reconstructed using spectrally-preconditioned, minimum-norm CS inversion followed by gridding reconstruction implemented in Matlab. The reconstruction on cardiac short axis (SA) and image fusion was performed by PMOD software. Results Pyruvate and its metabolic products lactate and bicarbonate were detected in the heart. Metabolic maps overlaid on anatomical images are shown in Figure 1. On SA sections the metabolites signal resulted correctly localized in cardiac structures: pyruvate more evident in ventricular cavity, bicarbonate in myocardial wall

Functional MRI Studies in Friedreich's Ataxia: A Systematic Review

Friedreich's ataxia (FRDA) is an inherited neurodegenerative movement disorder with early onset, widespread cerebral and cerebellar pathology, and no cure still available. Functional MRI (fMRI) studies, although currently limited in number, have provided a better understanding of brain changes in people with FRDA. This systematic review aimed to provide a critical overview of the findings and methodologies of all fMRI studies conducted in genetically confirmed FRDA so far, and to offer recommendations for future study designs. About 12 cross-sectional and longitudinal fMRI studies, included 198 FRDA children and young adult patients and, 205 healthy controls (HCs), according to the inclusion criteria. Details regarding GAA triplet expansion and demographic and clinical severity measures were widely reported. fMRI designs included motor and cognitive task paradigms, and resting-state studies, with widespread changes in functionally activated areas and extensive variability in study methodologies. These studies highlight a mixed picture of both hypoactivation and hyperactivation in different cerebral and cerebellar brain regions depending on fMRI design and cohort characteristics. Functional changes often correlate with clinical variables. In aggregate, the findings provide support for cerebro-cerebellar loop damage and the compensatory mechanism hypothesis. Current literature indicates that fMRI is a valuable tool for gaining in vivo insights into FRDA pathology, but addressing that its limitations would be a key to improving the design, interpretation, and generalizability of studies in the future