Chromosome mapping: radiation hybrid data and stochastic spin models

This work approaches human chromosome mapping by developing algorithms for ordering markers associated with radiation hybrid data. Motivated by recent work of Boehnke et al. [1], we formulate the ordering problem by developing stochastic spin models to search for minimum-break marker configurations. As a particular application, the methods developed are applied to 14 human chromosome-21 markers tested by Cox et al. [2]. The methods generate configurations consistent with the best found by others. Additionally, we find that the set of low-lying configurations is described by a Markov-like ordering probability distribution. The distribution displays cluster correlations reflecting closely linked loci.Comment: 26 Pages, uuencoded LaTex, Submitted to Phys. Rev. E, [email protected], [email protected]

Phenomenological Study of Strong Decays of Heavy Hadrons in Heavy Quark Effective Theory

The application of the tensor formalism of the heavy quark effective theory (HQET) at leading order to strong decays of heavy hadrons is presented. Comparisons between experimental and theoretical predictions of ratios of decay rates for B mesons, D mesons and kaons are given. The application of HQET to strange mesons presents some encouraging results. The spin-flavor symmetry is used to predict some decay rates that have not yet been measured.Comment: 10 page

Excited Heavy Mesons Beyond Leading Order in the Heavy Quark Expansion

We examine the decays of excited heavy mesons, including the leading power corrections to the heavy quark limit. We find a new and natural explanation for the large deviation of the width of the $D_1(2420)$ from the heavy quark symmetry prediction. Our formalism leads to detailed predictions for the properties of the excited bottom mesons, some of which recently have been observed. Finally, we present a detailed analysis of the effect of power corrections and finite meson widths on the angular distributions which may be measured in heavy meson decays.Comment: Uses REVTeX, 19 pages, 6 EPS figures embedded with epsf.st

Modeling surf zone tracer plumes : 2. Transport and dispersion

Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): C11028, doi:10.1029/2011JC007211.Five surf zone dye tracer releases from the HB06 experiment are simulated with a tracer advection diffusion model coupled to a Boussinesq surf zone model (funwaveC). Model tracer is transported and stirred by currents and eddies and diffused with a breaking wave eddy diffusivity, set equal to the breaking wave eddy viscosity, and a small (0.01 m2 s−1) background diffusivity. Observed and modeled alongshore parallel tracer plumes, transported by the wave driven alongshore current, have qualitatively similar cross-shore structures. Although the model skill for mean tracer concentration is variable (from negative to 0.73) depending upon release, cross-shore integrated tracer moments (normalized by the cross-shore tracer integral) have consistently high skills (≈0.9). Modeled and observed bulk surf zone cross-shore diffusivity estimates are also similar, with 0.72 squared correlation and skill of 0.4. Similar to the observations, the model bulk (absolute) cross-shore diffusivity is consistent with a mixing length parameterization based on low-frequency (0.001–0.03 Hz) eddies. The model absolute cross-shore dispersion is dominated by stirring from surf zone eddies and does not depend upon the presence of the breaking wave eddy diffusivity. Given only the bathymetry and incident wave field, the coupled Boussinesq-tracer model qualitatively reproduces the observed cross-shore absolute tracer dispersion, suggesting that the model can be used to study surf zone tracer dispersion mechanisms.This research was supported by SCCOOS, CA Coastal Conservancy, NOAA, NSF, ONR, and CA Sea Grant.2012-05-1

Effects of CP Violation on Event Rates in the Direct Detection of Dark Matter

A full analytic analysis of the effects of CP violating phases on the event rates in the direct detection of dark matter in the scattering of neutralinos from nuclear targets is given. The analysis includes CP violating phases in softly broken supersymmetry in the framework of the minimal supersymmetric standard model (MSSM) when generational mixings are ignored. A numerical analysis shows that large CP violating phases including the constraints from the experimental limits on the neutron and the electron electric dipole moment (EDM) can produce substantial effects on the event rates in dark matter detectors.Comment: 17 pages, LaTex, including 2 figures; revised version to appear in the Physical Review

On the EDM Cancellations in D-brane models

We analyze the possibility of simultaneous electron, neutron, and mercury electric dipole moment (EDM) cancellations in the mSUGRA and D--brane models. We find that the mercury EDM constraint practically rules out the cancellation scenario in D-brane models whereas in the context of mSUGRA it is still allowed with some fine-tuning.Comment: 10 pages, to appear in Phys. Rev. Let

Biodiesel fuel quality of canola feedstock grown on saline land

Non-Peer ReviewedVegetable oil from canola-grade feedstock ranks among the best in the production of fatty acid methyl esters (FAME or biodiesel). FAME produced from canola-quality oilseed grown on salt-affected lands offer new opportunities for increased production and counter fuel-versus-food concerns provided the biodiesel product meets quality standards. The American Society for Testing and Materials (ASTM) has set the North American fuel quality standards (D6751) for 100% biodiesel (B100) to be blended with petrodiesel fuel. Canola-quality feedstock yield oil low in free fatty acids, acids which are not bonded to parent oil molecules. These free acids may negatively affect diesel engine components, especially at biodiesel oil blends greater than 20%. Also, solid and dissolved impurities, alkali/alkaline earth metals, and oxidation stability are of concern to fuel injection equipment manufacturers. Ultimately, purity, composition, and biodiesel utility depend on the quality of the feedstock supplied. Processing can improve purity, but not composition. Contaminants in biodiesel fuel may include water, sediment, S, P, K, Na, Ca, Mg, carbon residue, and various other constituents in its sulphated ash. Canterra 1818 canola feedstock grown on negligibly, slightly, moderately, and severely salinized soil were crushed and tested for biodiesel fuel quality. All samples yielded biofuel within the ASTM International specifications except for free glycerol in the negligibly-saline sample

Supersymmetric CP Violation in B→Xsl+l−B \to X_s l^+ l^- in Minimal Supergravity Model

Direct CP asymmetries and the CP violating normal polarization of lepton in inclusive decay B \to X_s l^+ l^- are investigated in minimal supergravity model with CP violating phases. The contributions coming from exchanging neutral Higgs bosons are included. It is shown that the direct CP violation in branching ratio, A_{CP}^1, is of {\cal{O}}(10^{-3}) for l=e, \mu, \tau. The CP violating normal polarization for l=\mu can reach 0.5 percent when tan\beta is large (say, 36). For l=\tau and in the case of large \tan\beta, the direct CP violation in backward-forward asymmetry, A_{CP}^2, can reach one percent, the normal polarization of \tau can be as large as a few percent, and both are sensitive to the two CP violating phases, \phi_\mu and \phi_{A_0}, and consequently it could be possible to observe them (in particular, the normal polarization of \tau) in the future B factories.Comment: 14 pages, latex, 5 figure

A relativistic chiral quark model for pseudoscalar emission from heavy mesons

The amplitudes for one-pion mediated transitions between heavy meson excited states are obtained in the framework of the relativistic chiral quark model. The effective coupling constants to pions and the decay widths of excited heavy mesons with l<=2 for non-radially excited, and the l=0 radially excited mesons are presented for both charmed and beauty mesons. We also discuss the allowed decays of strange excited heavy mesons by emission of a K-meson.Comment: 20 pages, revte