Additional file 1: of Genome-Based Identification of Heterotic Patterns in Rice

for Genome-based identification of heterotic. Figure S1. Decay of linkage disequilibrium measured using r2 with physical map distance. Figure S2. Principal coordinate analysis of all parental lines for market segments LS, MM, and SS. Figure S3. Applied cross validation scenario exemplifying the selected fractions for market segment MM. Figure S4. Unbalanced factorial crossing designs for market segment (A) LS, (B) MM, and (C) SS. Figure S5. Venn diagram of overlapping parental lines of the hybrid evaluation trials in market segments LS, MM, and SS. Figure S6. Experimental design and distribution of checks for hybrid experiment of market segment MM at location HYD. Orange and black lines represent the size of trials and blocks, respectively. White plots were not phenotyped. Table S1. Composition of heterotic groups selected with the simulated annealing algorithm as well as the average hybrid performance between both heterotic groups (Inter) for the market segments LS, MM, and SS. Table S2. Composition of estimation and test populations for market segment LS, MM, and SS. (DOCX 1811 kb

Additional file 2: of Genome-Based Identification of Heterotic Patterns in Rice

Best linear unbiased estimations for hybrid grain yield experiments in market segments LS, MM, and SS. (XLSX 76 kb