One-dimensional classical adjoint SU(2) Coulomb Gas

The equation of state of a one-dimensional classical nonrelativistic Coulomb gas of particles in the adjoint representation of SU(2) is given. The problem is solved both with and without sources in the fundamental representation at either end of the system. The gas exhibits confining properties at low densities and temperatures and deconfinement in the limit of high densities and temperatures. However, there is no phase transition to a regime where the string tension vanishes identically; true deconfinement only happens for infinite densities and temperatures. In the low density, low temperature limit, a new type of collective behavior is observed.Comment: 6 pages, 1 postscript figur

On the Spectrum of QCD(1+1) with SU(N_c) Currents

Extending previous work, we calculate in this note the fermionic spectrum of two-dimensional QCD (QCD_2) in the formulation with SU(N_c) currents. Together with the results in the bosonic sector this allows to address the as yet unresolved task of finding the single-particle states of this theory as a function of the ratio of the numbers of flavors and colors, \lambda=N_f/N_c, anew. We construct the Hamiltonian matrix in DLCQ formulation as an algebraic function of the harmonic resolution K and the continuous parameter \lambda. Amongst the more surprising findings in the fermionic sector chiefly considered here is that the fermion momentum is a function of \lambda. This dependence is necessary in order to reproduce the well-known 't Hooft and large N_f spectra. Remarkably, those spectra have the same single-particle content as the ones in the bosonic sectors. The twist here is the dramatically different sizes of the Fock bases in the two sectors, which makes it possible to interpret in principle all states of the discrete approach. The hope is that some of this insight carries over into the continuum. We also present some new findings concerning the single-particle spectrum of the adjoint theory.Comment: 21 pp., 13 figures, version published in PR

`Oumuamua as a messenger from the Local Association

7 pages, one table, two figures, accepted for publication by ApJL. © 2018. The American Astronomical Society. All rights reserved.With a hyperbolic trajectory around the Sun, 'Oumuamua is the first confirmed interstellar object. However, its origin is poorly known. By simulating the orbits of 0.23 million local stars, we find 109 encounters with periastron less than 5 pc. 'Oumuamua's low peculiar velocity is suggestive of its origin from a young stellar association with similar velocity. In particular, we find that 'Oumuamua would have had slow encounters with at least five young stars belonging to the Local Association, thus suggesting these as plausible sites for formation and ejection. In addition to an extremely elongated shape, the available observational data for 'Oumuamua indicates a red color, suggestive of a potentially organic-rich and activity-free surface. These characteristics seem consistent with formation through energetic collisions between planets and debris objects in the middle part of a young stellar system. We estimate an abundance of at least 6.0 × 10 -3 au -3 for such interstellar objects with mean diameter larger than 100 m and find that it is likely that most of them will be ejected into the Galactic halo. Our Bayesian analysis of the available light curves indicates a rotation period of 6.96 +1.45 -0.39, which is consistent with the estimation by Meech et al. and shorter than those in other literature. The codes and results are available on GitHub (https://github.com/phillippro/Oumuamua).Peer reviewe

ProbCD: enrichment analysis accounting for categorization uncertainty

As in many other areas of science, systems biology makes extensive use of statistical association and significance estimates in contingency tables, a type of categorical data analysis known in this field as enrichment (also over-representation or enhancement) analysis. In spite of efforts to create probabilistic annotations, especially in the Gene Ontology context, or to deal with uncertainty in high throughput-based datasets, current enrichment methods largely ignore this probabilistic information since they are mainly based on variants of the Fisher Exact Test. We developed an open-source R package to deal with probabilistic categorical data analysis, ProbCD, that does not require a static contingency table. The contingency table for
the enrichment problem is built using the expectation of a Bernoulli Scheme stochastic process given the categorization probabilities. An on-line interface was created to allow usage by non-programmers and is available at: http://xerad.systemsbiology.net/ProbCD/. We present an analysis framework and software tools to address the issue of uncertainty in categorical data analysis. In particular, concerning the enrichment analysis, ProbCD can accommodate: (i) the stochastic nature of the high-throughput experimental techniques and (ii) probabilistic gene annotation

Quasinormal modes and holographic correlators in a crunching AdS geometry

We calculate frequency space holographic correlators in an asymptotically AdS crunching background, dual to a relevant deformation of the M2-brane CFT placed in de Sitter spacetime. For massless bulk scalars, exploiting the connection to a solvable supersymmetric quantum mechanical problem, we obtain the exact frequency space correlator for the dual operator in the deformed CFT. Controlling the shape of the crunching surface in the Penrose diagram by smoothly dialling the deformation from zero to infinity, we observe that in the large deformation limit the Penrose diagram becomes a `square', and the exact holographic correlators display striking similarities to their counterparts in the BTZ black hole and its higher dimensional generalisations. We numerically determine quasinormal poles for relevant and irrelevant operators, and find an intricate pattern of these in the complex frequency plane. In the case of relevant operators, the deformation parameter has an infinite sequence of critical values, each one characterised by a pair of poles colliding and moving away from the imaginary frequency axis with increasing deformation. In the limit of infinite deformation all scalar operators have identical quasinormal spectra. We compare and contrast our strongly coupled de Sitter QFT results with strongly coupled thermal correlators from AdS black holes

Nanopods: A New Bacterial Structure and Mechanism for Deployment of Outer Membrane Vesicles

Background: Bacterial outer membrane vesicles (OMV) are packets of periplasmic material that, via the proteins and other molecules they contain, project metabolic function into the environment. While OMV production is widespread in proteobacteria, they have been extensively studied only in pathogens, which inhabit fully hydrated environments. However, many (arguably most) bacterial habitats, such as soil, are only partially hydrated. In the latter, water is characteristically distributed as films on soil particles that are, on average thinner, than are typical OMV (ca. ≤10 nm water film vs. 20 to >200 nm OMV;). Methodology/Principal Findings: We have identified a new bacterial surface structure, termed a "nanopod", that is a conduit for projecting OMV significant distances (e.g., ≥6 µm) from the cell. Electron cryotomography was used to determine nanopod three-dimensional structure, which revealed chains of vesicles within an undulating, tubular element. By using immunoelectron microscopy, proteomics, heterologous expression and mutagenesis, the tubes were determined to be an assembly of a surface layer protein (NpdA), and the interior structures identified as OMV. Specific metabolic function(s) for nanopods produced by Delftia sp. Cs1-4 are not yet known. However, a connection with phenanthrene degradation is a possibility since nanopod formation was induced by growth on phenanthrene. Orthologs of NpdA were identified in three other genera of the Comamonadaceae family, and all were experimentally verified to form nanopods. Conclusions/Significance: Nanopods are new bacterial organelles, and establish a new paradigm in the mechanisms by which bacteria effect long-distance interactions with their environment. Specifically, they create a pathway through which cells can effectively deploy OMV, and the biological activity these transmit, in a diffusion-independent manner. Nanopods would thus allow environmental bacteria to expand their metabolic sphere of influence in a manner previously unknown for these organisms

Diagonal deformations of thin center vortices and their stability in Yang-Mills theories

The importance of center vortices for the understanding of the confining properties of SU(N) Yang-Mills theories is well established in the lattice. However, in the continuum, there is a problem concerning the relevance of center vortex backgrounds. They display the so called Savvidy-Nielsen-Olesen instability, associated with a gyromagnetic ratio $g^{(b)}_m=2$ for the off-diagonal gluons. In this work, we initially consider the usual definition of a {\it thin} center vortex and rewrite it in terms of a local color frame in SU(N) Yang-Mills theories. Then, we define a thick center vortex as a diagonal deformation of the thin object. Besides the usual thick background profile, this deformation also contains a frame defect coupled with gyromagnetic ratio $g^{(d)}_m=1$, originated from the charged sector. As a consequence, the analysis of stability is modified. In particular, we point out that the defect should stabilize a vortex configuration formed by a pair of straight components separated by an appropriate finite distance.Comment: 20 pages, LaTe