Developmenrt of EST-SSR and genomic-SSR markers to assess genetic diversity in Jatropha Curcas L.

<p>Abstract</p> <p>Background</p> <p><it>Jatropha curcas L. </it>has attracted a great deal of attention worldwide, regarding its potential as a new biodiesel crop. However, the understanding of this crop remains very limited and little genomic research has been done. We used simple sequence repeat (SSR) markers that could be transferred from <it>Manihot esculenta </it>(cassava) to analyze the genetic relationships among 45 accessions of <it>J. curcas </it>from our germplasm collection.</p> <p>Results</p> <p>In total, 187 out of 419 expressed sequence tag (EST)-SSR and 54 out of 182 genomic (G)-SSR markers from cassava were polymorphic among the <it>J. curcas </it>accessions. The EST-SSR markers comprised 26.20% dinucleotide repeats, 57.75% trinucleotide repeats, 7.49% tetranucleotide repeats, and 8.56% pentanucleotide repeats, whereas the majority of the G-SSR markers were dinucleotide repeats (62.96%). The 187 EST-SSRs resided in genes that are involved mainly in biological and metabolic processes. Thirty-six EST-SSRs and 20 G-SSRs were chosen to analyze the genetic diversity among 45 <it>J. curcas </it>accessions. A total of 183 polymorphic alleles were detected. On the basis of the distribution of these polymorphic alleles, the 45 accessions were classified into six groups, in which the genotype showed a correlation with geographic origin. The estimated mean genetic diversity index was 0.5572, which suggests that our <it>J. curcas </it>germplasm collection has a high level of genetic diversity. This should facilitate subsequent studies on genetic mapping and molecular breeding.</p> <p>Conclusion</p> <p>We identified 241 novel EST-SSR and G-SSR markers in <it>J. curcas</it>, which should be useful for genetic mapping and quantitative trait loci analysis of important agronomic traits. By using these markers, we found that the intergroup gene diversity of <it>J. curcas </it>was greater than the intragroup diversity, and that the domestication of the species probably occurred partly in America and partly in Hainan, China.</p

High field &lt;sup&gt;13&lt;/sup&gt;C NMR spectroscopic analysis of the triacylglycerols of &lt;i&gt;Adenopus Breviflorus&lt;/i&gt; seeds oil

High resolution Carbon-13 NMR (gated decoupled) spectra of the carbonyl, saturated and olefinic carbons in Adenopus breviflorus seeds oil have been used for direct determination of the acyl composition and acyl positional distribution on the glycerol backbone. The spectra revealed the presence of saturated, oleic and linoleic fatty acids. Semi-quantitative analysis using the integrals of the allylic carbons signals gave the percentage composition of the oil as saturated 25.00%, oleic 14.00% and linoleic 60.90%. These percentage composition were confirmed by gas chromatography. The spectra further revealed that while the saturated fatty acids are distributed between the 1,3(&alpha;) and 2 (&beta;) glyceridic positions, oleic acid is attached only at the &alpha; glyceridic positions while linoleic acid is attached mostly at the (&beta;) glyceridic position. Ife Journal of Science Vol.6(1) 2004: 50-5

Evaluation of dough rheological properties and bread texture of pearl millet-wheat flour mix

This study was undertaken with the objective of formulating composite bread using pearl millet (Pennisetum glaucum) and wheat (Triticum aestivum) flours . Rheological and bread making properties of composite flours were evaluated. Mixolab results revealed torque increased and dough stability time decreased upon incorporation of pearl millet flour in wheat flour. The incorporation of millet flour at optimum level (5 %) led to an increase of the dough strength (W) and the elasticity-to-extensibility ratio (P/L) by 31 % and 65 % respectively. The bread texture and volume were also improved. These findings indicated the potentiality of using millet flour in bread making