Monitoring canid scent marking in space and time using a biologging and machine learning approach

For canid species, scent marking plays a critical role in territoriality, social dynamics, and reproduction. However, due in part to human dependence on vision as our primary sensory modality, research on olfactory communication is hampered by a lack of tractable methods. In this study, we leverage a powerful biologging approach, using accelerometers in concert with GPS loggers to monitor and describe scent-marking events in time and space. We performed a validation experiment with domestic dogs, monitoring them by video concurrently with the novel biologging approach. We attached an accelerometer to the pelvis of 31 dogs (19 males and 12 females), detecting raised-leg and squat posture urinations by monitoring the change in device orientation. We then deployed this technique to describe the scent marking activity of 3 guardian dogs as they defend livestock from coyote depredation in California, providing an example use-case for the technique. During validation, the algorithm correctly classifed 92% of accelerometer readings. High performance was partly due to the conspicuous signatures of archetypal raised-leg postures in the accelerometer data. Accuracy did not vary with the weight, age, and sex of the dogs, resulting in a method that is broadly applicable across canid species’ morphologies. We also used models trained on each individual to detect scent marking of others to emulate the use of captive surrogates for model training. We observed no relationship between the similarity in body weight between the dog pairs and the overall accuracy of predictions, although models performed best when trained and tested on the same individual. We discuss how existing methods in the feld of movement ecology can be extended to use this exciting new data type. This paper represents an important frst step in opening new avenues of research by leveraging the power of modern-technologies and machine-learning to this feldFil: Bidder, Owen. University of California at Berkeley; Estados UnidosFil: Di Virgilio, Agustina Soledad. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Patagonia Norte. Instituto de Investigaciones en Biodiversidad y Medioambiente. Universidad Nacional del Comahue. Centro Regional Universidad Bariloche. Instituto de Investigaciones en Biodiversidad y Medioambiente; ArgentinaFil: Hunter, Jennifer. University of California at Berkeley; Estados UnidosFil: McInturff, Alex. University of California at Berkeley; Estados UnidosFil: Gaynor, Kaitlyn. University of California at Berkeley; Estados UnidosFil: Smith, Alison. University of California at Berkeley; Estados UnidosFil: Dorcy, Janelle. University of California at Berkeley; Estados UnidosFil: Rosell, Frank. University of South-Eastern Norway; Norueg