92 research outputs found

    Effects of Preservation with Pre-Fermented Green Juice (FGJ) on Fermentation Quality and Energy and Nitrogen Utilization of Round-Baled Alfalfa Silage by Dairy Cattle

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    This study was conducted to examine the effects of pre-fermented green juice (FGJ) of epiphytic lactic acid bacteria (LAB) on the fermentation quality and animal performance of round-baled alfalfa silage (Medicago stativa L.,cv. Dupuits). Ensiling treatments of wilting and FGJ additives (WFGJ) and direct-cut and FGJ additives (DFGJ) improved the fermentation quality of alfalfa silage more than that of wilting (W). Enhanced fermentation in the WFGJ and DFGJ silage was also associated with the increases of energy and nitrogen utilization of the silage by dry Holstein dairy cattle, as fed on diets formulated with alfalfa silage, oat hay, and oat grains

    At-sea experiment of adaptive time-reversal multiuser communication in the deep ocean

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    An at-sea experiment of multiuser communication in deep water using adaptive time reversal was carried out. In the experiment, two sources and a 20-channel receiver array were deployed at the range of 30 km in an area of 1500-2000 m water depth. One of the sources was moored and the other was suspended at various depths. For processing signals actually transmitted from two sources, it was demonstrated that adaptive time reversal could cancel multiuser interference independently of relative source positions. Additionally, for a more detailed investigation, the analysis of multiuser test signals by synthesizing signals from different depths was performed. As a result, especially in the case of adjacent sources, adaptive time reversal significantly suppressed crosstalk.http://www.godac.jamstec.go.jp/darwin/cruise/kaiyo/ky15-01/

    Identification of 45 New Neutron-Rich Isotopes Produced by In-Flight Fission of a 238U Beam at 345 MeV/nucleon

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    A search for new isotopes using in-flight fission of a 345 MeV/nucleon 238U beam has been carried out at the RI Beam Factory at the RIKEN Nishina Center. Fission fragments were analyzed and identified by using the superconducting in-flight separator BigRIPS. We observed 45 new neutron-rich isotopes: 71Mn, 73,74Fe, 76Co, 79Ni, 81,82Cu, 84,85Zn, 87Ga, 90Ge, 95Se, 98Br, 101Kr, 103Rb, 106,107Sr, 108,109Y, 111,112Zr, 114,115Nb, 115,116,117Mo, 119,120Tc, 121,122,123,124Ru, 123,124,125,126Rh, 127,128Pd, 133Cd, 138Sn, 140Sb, 143Te, 145I, 148Xe, and 152Ba

    Experimental study on multiple-input/multiple-output communication with time reversal in deep ocean

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    Multiple-input/multiple-output (MIMO) communication using adaptive time reversal is discussed comparing with orthogonal frequency division multiplexing (OFDM) with simulated MIMO test signals by synthesizing experimental data in deep ocean. The experiment was executed in 1,100-m-depth area at the range of 10 km with the bandwidth of 500 +/- 50 Hz. Although time variance is not included in analysis of OFDM, it is impossible to increase MIMO channels with OFDM. In the meantime, with adaptive time reversal, it is possible to achieve 8 x 20 and 6 x 20 MIMO communication with binary phase shift keying (BPSK) and quadrature phase shift keying (QPSK), respectively, in spite of time variance and input SNRs degradation due to synthesizing signals. Thus, it is demonstrated that adaptive time reversal has much better performance than OFDM in MIMO underwater acoustic communication.http://www.godac.jamstec.go.jp/darwin/cruise/kaiyo/ky15-15/

    Virological characteristics of the SARS-CoV-2 BA.2.86 variant

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    オミクロンBA.2.86株のウイルス学的特性の解明. 京都大学プレスリリース. 2024-01-30.A comprehensive systematic characterization of the SARS-CoV-2 strain BA.2.86. 京都大学プレスリリース. 2024-01-31.In late 2023, several SARS-CoV-2 XBB descendants, notably EG.5.1, were predominant worldwide. However, a distinct SARS-CoV-2 lineage, the BA.2.86 variant, also emerged. BA.2.86 is phylogenetically distinct from other Omicron sublineages, accumulating over 30 amino acid mutations in its spike protein. Here, we examined the virological characteristics of the BA.2.86 variant. Our epidemic dynamics modeling suggested that the relative reproduction number of BA.2.86 is significantly higher than that of EG.5.1. Additionally, four clinically available antivirals were effective against BA.2.86. Although the fusogenicity of BA.2.86 spike is similar to that of the parental BA.2 spike, the intrinsic pathogenicity of BA.2.86 in hamsters was significantly lower than that of BA.2. Since the growth kinetics of BA.2.86 are significantly lower than those of BA.2 both in vitro and in vivo, the attenuated pathogenicity of BA.2.86 is likely due to its decreased replication capacity. These findings uncover the features of BA.2.86, providing insights for control and treatment

    Virological characteristics of the SARS-CoV-2 Omicron BA.2.75 variant

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    SARS-CoV-2オミクロンBA.2.75株(通称ケンタウロス)のウイルス学的性状の解明. 京都大学プレスリリース. 2022-10-12.The SARS-CoV-2 Omicron BA.2.75 variant emerged in May 2022. BA.2.75 is a BA.2 descendant but is phylogenetically distinct from BA.5, the currently predominant BA.2 descendant. Here, we show that BA.2.75 has a greater effective reproduction number and different immunogenicity profile than BA.5. We determined the sensitivity of BA.2.75 to vaccinee and convalescent sera as well as a panel of clinically available antiviral drugs and antibodies. Antiviral drugs largely retained potency but antibody sensitivity varied depending on several key BA.2.75-specific substitutions. The BA.2.75 spike exhibited a profoundly higher affinity for its human receptor, ACE2. Additionally, the fusogenicity, growth efficiency in human alveolar epithelial cells, and intrinsic pathogenicity in hamsters of BA.2.75 were greater than those of BA.2. Our multilevel investigations suggest that BA.2.75 acquired virological properties independent of BA.5, and the potential risk of BA.2.75 to global health is greater than that of BA.5

    Convergent evolution of SARS-CoV-2 Omicron subvariants leading to the emergence of BQ.1.1 variant

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    In late 2022, various Omicron subvariants emerged and cocirculated worldwide. These variants convergently acquired amino acid substitutions at critical residues in the spike protein, including residues R346, K444, L452, N460, and F486. Here, we characterize the convergent evolution of Omicron subvariants and the properties of one recent lineage of concern, BQ.1.1. Our phylogenetic analysis suggests that these five substitutions are recurrently acquired, particularly in younger Omicron lineages. Epidemic dynamics modelling suggests that the five substitutions increase viral fitness, and a large proportion of the fitness variation within Omicron lineages can be explained by these substitutions. Compared to BA.5, BQ.1.1 evades breakthrough BA.2 and BA.5 infection sera more efficiently, as demonstrated by neutralization assays. The pathogenicity of BQ.1.1 in hamsters is lower than that of BA.5. Our multiscale investigations illuminate the evolutionary rules governing the convergent evolution for known Omicron lineages as of 2022

    Virological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariants

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    In late 2022, SARS-CoV-2 Omicron subvariants have become highly diversified, and XBB is spreading rapidly around the world. Our phylogenetic analyses suggested that XBB emerged through the recombination of two cocirculating BA.2 lineages, BJ.1 and BM.1.1.1 (a progeny of BA.2.75), during the summer of 2022. XBB.1 is the variant most profoundly resistant to BA.2/5 breakthrough infection sera to date and is more fusogenic than BA.2.75. The recombination breakpoint is located in the receptor-binding domain of spike, and each region of the recombinant spike confers immune evasion and increases fusogenicity. We further provide the structural basis for the interaction between XBB.1 spike and human ACE2. Finally, the intrinsic pathogenicity of XBB.1 in male hamsters is comparable to or even lower than that of BA.2.75. Our multiscale investigation provides evidence suggesting that XBB is the first observed SARS-CoV-2 variant to increase its fitness through recombination rather than substitutions
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