164 research outputs found
Site occupancies and their effects on the physical properties of spinel : an {\it ab initio} study
Recent experimental studies on Fe substituted spinel CoCrO have
discovered multiple functional properties in the system such as temperature and
composition dependent magnetic compensation, tunable exchange bias and
magnetostriction. These properties are attributed to the renormalisation of the
inter-atomic magnetic exchange interactions arising due to the non-regular site
occupancies of the magnetic cations in the system. In this work, we perform
{\it ab initio} electronic structure calculations by DFT+U method and combine
with a generalised thermodynamic model to compute the site occupancy patterns
of the magnetic cations, the structural properties and the magnetic exchange
interactions of CoO for the entire
composition range . We find that the substituting Fe atoms prefer to
occupy the tetrahedral sites of the spinel structure for the entire range of
, in agreement with the experimental inferences. Our results on the
variations of the structural parameters with compositions agree very well with
the experiments. By computing the variations of the various inter-atomic
magnetic exchange interactions, we provide a microscopic picture of the
evolution of a collinear structure from a non-collinear one due to substitution
of Fe in CoCrO. The computed results are analysed in terms of the
elements of the crystal field theory, and the features in the atoms and
orbital-projected densities of states. The results and analysis presented in
this work is the first comprehensive study on this system which would help
understanding the complexities associated with the site occupancies, the
electronic structures and the magnetic interactions in this multi-functional
material.Comment: Submitted in Journal of Physics
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A predictive computational model reveals that GIV/girdin serves as a tunable valve for EGFR-stimulated cyclic AMP signals.
Cellular levels of the versatile second messenger cyclic (c)AMP are regulated by the antagonistic actions of the canonical G protein → adenylyl cyclase pathway that is initiated by G-protein-coupled receptors (GPCRs) and attenuated by phosphodiesterases (PDEs). Dysregulated cAMP signaling drives many diseases; for example, its low levels facilitate numerous sinister properties of cancer cells. Recently, an alternative paradigm for cAMP signaling has emerged in which growth factor-receptor tyrosine kinases (RTKs; e.g., EGFR) access and modulate G proteins via a cytosolic guanine-nucleotide exchange modulator (GEM), GIV/girdin; dysregulation of this pathway is frequently encountered in cancers. In this study, we present a network-based compartmental model for the paradigm of GEM-facilitated cross-talk between RTKs and G proteins and how that impacts cellular cAMP. Our model predicts that cross-talk between GIV, Gαs, and Gαi proteins dampens ligand-stimulated cAMP dynamics. This prediction was experimentally verified by measuring cAMP levels in cells under different conditions. We further predict that the direct proportionality of cAMP concentration as a function of receptor number and the inverse proportionality of cAMP concentration as a function of PDE concentration are both altered by GIV levels. Taking these results together, our model reveals that GIV acts as a tunable control valve that regulates cAMP flux after growth factor stimulation. For a given stimulus, when GIV levels are high, cAMP levels are low, and vice versa. In doing so, GIV modulates cAMP via mechanisms distinct from the two most often targeted classes of cAMP modulators, GPCRs and PDEs
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