Additional file 1: of Huntingtin-associated protein 1: Eutherian adaptation from a TRAK-like protein, conserved gene promoter elements, and localization in the human intestine

Identity matrix showing pairwise percentage amino acid sequence identity between HAP1 family proteins: TRAK1 and TRAK2 (human, opossum, zebrafish, Xenopus, anole lizard, chicken), HAP1 (species as above, plus rat, dog, and Tasmanian devil), Drosophila (fruitfly) Milton, and C. elegans (nematode) T27A3.1. Sequence identifiers are as indicated in Materials and methods. (JPG 1967 kb

MOESM2 of ICAM-1-related long non-coding RNA: promoter analysis and expression in human retinal endothelial cells

Additional file 2: Table S2. Predicted transcription factor binding sites within genome evolutionary rate profiling (GERP)-constrained elements

MOESM4 of ICAM-1-related long non-coding RNA: promoter analysis and expression in human retinal endothelial cells

Additional file 4: Table S4. Primer pairs and product sizes for gene transcripts studied in human retinal endothelial cells. References are provided for primers sequences sourced from the literature

MOESM3 of ICAM-1-related long non-coding RNA: promoter analysis and expression in human retinal endothelial cells

Additional file 3: Table S3. Description of phenotype-nucleotide polymorphisms (SNPs) predicted to influence transcription of the human ICR gene

MOESM1 of ICAM-1-related long non-coding RNA: promoter analysis and expression in human retinal endothelial cells

Additional file 1: Table S1. Sources for eutherian genomes used in genome evolutionary rate profiling (GERP) and chromosomal locations of GERP-constrained elements