Woodland birds and rural towns: artificial clutch survival in fragmented Box-Ironbark forests

Woodland birds are declining throughout the agricultural landscapes of south-eastern Australia, but the specific mechanisms driving these declines remain unclear. Reproductive failure via clutch depredation could conceivably contribute to these declines. Although site-scale habitat may influence the risk of clutch failure, larger-scale influences, such as whether a landscape contains a rural town or not (‘landscape type’), may also play a role. This study monitored artificial open-cup nests deployed in three pairs of the two landscape types and: 1) indexed clutch survival and predator assemblage; and 2) determined if clutch survival was influenced by landscape type and/or local habitat characteristics. High levels of clutch depredation were observed in both landscape types and for all landscapes, with no evidence to suggest that landscape type or habitat characteristics influenced clutch survival or the time-to-first-predator visit. Predator assemblage also was consistent between landscape types. Generalist avian predators were the most common egg predators. Such egg predators may be ubiquitous throughout the fragmented Box-Ironbark woodlands of south-eastern Australia

Activity patterns of free-ranging koalas (Phascolarctos cinereus) revealed by accelerometry

An understanding of koala activity patterns is important for measuring the behavioral response of this species to environmental change, but to date has been limited by the logistical challenges of traditional field methodologies. We addressed this knowledge gap by using tri-axial accelerometer data loggers attached to VHF radio collars to examine activity patterns of adult male and female koalas in a high-density population at Cape Otway, Victoria, Australia. Data were obtained from 27 adult koalas over two 7-d periods during the breeding season: 12 in the early-breeding season in November 2010, and 15 in the late-breeding season in January 2011. Multiple 15 minute observation blocks on each animal were used for validation of activity patterns determined from the accelerometer data loggers. Accelerometry was effective in distinguishing between inactive (sleeping, resting) and active (grooming, feeding and moving) behaviors. Koalas were more active during the early-breeding season with a higher index of movement (overall dynamic body acceleration [ODBA]) for both males and females. Koalas showed a distinct temporal pattern of behavior, with most activity occurring from mid-afternoon to early morning. Accelerometry has potential for examining fine-scale behavior of a wide range of arboreal and terrestrial species

Competition between Phytophthora infestans Effectors Leads to Increased Aggressiveness on Plants Containing Broad-Spectrum Late Blight Resistance

BACKGROUND: The destructive plant disease potato late blight is caused by the oomycete pathogen Phytophthora infestans (Mont.) de Bary. This disease has remained particularly problematic despite intensive breeding efforts to integrate resistance into cultivated potato, largely because of the pathogen's ability to quickly evolve to overcome major resistance genes. The RB gene, identified in the wild potato species S. bulbocastanum, encodes a protein that confers broad-spectrum resistance to most P. infestans isolates through its recognition of highly conserved members of the corresponding pathogen effector family IPI-O. IpiO is a multigene family of effectors and while the majority of IPI-O proteins are recognized by RB to elicit host resistance, some variants exist that are able to elude detection (e.g. IPI-O4). METHODS AND FINDINGS: In the present study, analysis of ipiO variants among 40 different P. infestans isolates collected from Guatemala, Thailand, and the United States revealed a high degree of complexity within this gene family. Isolate aggressiveness was correlated with increased ipiO diversity and especially the presence of the ipiO4 variant. Furthermore, isolates expressing IPI-O4 overcame RB-mediated resistance in transgenic potato plants even when the resistance-eliciting IPI-O1 variant was present. In support of this finding, we observed that expression of IPI-O4 via Agrobacterium blocked recognition of IPI-O1, leading to inactivation of RB-mediated programmed cell death in Nicotiana benthamiana. CONCLUSIONS: In this study we definitively demonstrate and provide the first evidence that P. infestans can defeat an R protein through inhibition of recognition of the corresponding effector protein

Does zonation and accessibility of wetlands influence human presence and mediate wildlife disturbance?

Zoning is one approach to managing human occurrence and reducing deleterious interactions between humans and wildlife. We investigated the occurrence of humans, and the responses of eight waterbird species to humans, at a major wetland/treatment plant/birdwatching destination. Human occurrence in three zones (‘open birdwatching’, ‘limited birdwatching’ and ‘restricted access’) was monitored using GPS tracking of visitor vehicles, surveys, geotagged social media uploads and remotely triggered cameras (on primary and secondary roadways). A higher diversity (but not frequency) of vehicle types and more walkers, more social media uploads, and greater usage occurred in zones in which birdwatching was permitted. Vehicles were less common and diverse on secondary roads, suggesting accessibility influenced human occurrence. Bird responsiveness to humans was similar across zones, perhaps because people were ubiquitous or because birds were mobile. Wildlife disturbance studies which use space-experience substitution designs are cautioned to test their assumptions regarding patterns of human visitation.</p

Does zonation and accessibility of wetlands influence human presence and mediate wildlife disturbance?

Zoning is one approach to managing human occurrence and reducing deleterious interactions between humans and wildlife. We investigated the occurrence of humans, and the responses of eight waterbird species to humans, at a major wetland/treatment plant/birdwatching destination. Human occurrence in three zones (‘open birdwatching’, ‘limited birdwatching’ and ‘restricted access’) was monitored using GPS tracking of visitor vehicles, surveys, geotagged social media uploads and remotely triggered cameras (on primary and secondary roadways). A higher diversity (but not frequency) of vehicle types and more walkers, more social media uploads, and greater usage occurred in zones in which birdwatching was permitted. Vehicles were less common and diverse on secondary roads, suggesting accessibility influenced human occurrence. Bird responsiveness to humans was similar across zones, perhaps because people were ubiquitous or because birds were mobile. Wildlife disturbance studies which use space-experience substitution designs are cautioned to test their assumptions regarding patterns of human visitation

Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome

Much of the pathogenic success of Phytophthora infestans, the potato and tomato late blight agent, relies on its ability to generate from mycelia large amounts of sporangia, which release zoospores that encyst and form infection structures. To better understand these stages, Affymetrix GeneChips based on 15,650 unigenes were designed and used to profile the life cycle. Approximately half of P. infestans genes were found to exhibit significant differential expression between developmental transitions, with approximately (1)/(10) being stage-specific and most changes occurring during zoosporogenesis. Quantitative reverse-transcription polymerase chain reaction assays confirmed the robustness of the array results and showed that similar patterns of differential expression were obtained regardless of whether hyphae were from laboratory media or infected tomato. Differentially expressed genes encode potential cellular regulators, especially protein kinases; metabolic enzymes such as those involved in glycolysis, gluconeogenesis, or the biosynthesis of amino acids or lipids; regulators of DNA synthesis; structural proteins, including predicted flagellar proteins; and pathogenicity factors, including cell-wall-degrading enzymes, RXLR effector proteins, and enzymes protecting against plant defense responses. Curiously, some stage-specific transcripts do not appear to encode functional proteins. These findings reveal many new aspects of oomycete biology, as well as potential targets for crop protection chemicals