62 research outputs found
Partial sequencing of the bottle gourd genome reveals markers useful for phylogenetic analysis and breeding
- Author
- A Sharma
- B Zhang
- Baogen Wang
- CB Heiser
- CD Li
- D Decker-Walters
- DA Bisognin
- DL Erickson
- DS Decker-Walters
- EG Achigan-Dako
- G Perrotta
- Guojing Li
- H Yetisir
- H Yetisir
- JA Anderson
- Jeffrey D Ehlers
- Jie Luo
- JM Lee
- L Zane
- M Miró
- MP Timko
- P Xu
- P Xu
- Pei Xu
- R Kolpakov
- RL Jarret
- Sha Wang
- SS Beevy
- SW Huang
- T Maguire
- TW Whitaker
- VM González
- WS Martins
- Xiaohua Wu
- Y Morimoto
- Y Morimoto
- Y Morimoto
- Y Ren
- Yonghua Liu
- Zhongfu Lu
- Publication venue
- BioMed Central
- Publication date
- 01/01/2011
- Field of study
<p>Abstract</p> <p>Background</p> <p>Bottle gourd [<it>Lagenaria siceraria </it>(Mol.) Standl.] is an important cucurbit crop worldwide. Archaeological research indicates that bottle gourd was domesticated more than 10,000 years ago, making it one of the earliest plants cultivated by man. In spite of its widespread importance and long history of cultivation almost nothing has been known about the genome of this species thus far.</p> <p>Results</p> <p>We report here the partial sequencing of bottle gourd genome using the 454 GS-FLX Titanium sequencing platform. A total of 150,253 sequence reads, which were assembled into 3,994 contigs and 82,522 singletons were generated. The total length of the non-redundant singletons/assemblies is 32 Mb, theoretically covering ~ 10% of the bottle gourd genome. Functional annotation of the sequences revealed a broad range of functional types, covering all the three top-level ontologies. Comparison of the gene sequences between bottle gourd and the model cucurbit cucumber (<it>Cucumis sativus</it>) revealed a 90% sequence similarity on average. Using the sequence information, 4395 microsatellite-containing sequences were identified and 400 SSR markers were developed, of which 94% amplified bands of anticipated sizes. Transferability of these markers to four other cucurbit species showed obvious decline with increasing phylogenetic distance. From analyzing polymorphisms of a subset of 14 SSR markers assayed on 44 representative China bottle gourd varieties/landraces, a principal coordinates (PCo) analysis output and a UPGMA-based dendrogram were constructed. Bottle gourd accessions tended to group by fruit shape rather than geographic origin, although in certain subclades the lines from the same or close origin did tend to cluster.</p> <p>Conclusions</p> <p>This work provides an initial basis for genome characterization, gene isolation and comparative genomics analysis in bottle gourd. The SSR markers developed would facilitate marker assisted breeding schemes for efficient introduction of desired traits.</p
Origin and evolution of cultivated cucurbits
- Author
- ARCE-OCHOA J.P.
- BAR-NUN N.
- BISOGNIN D.A.
- CHAMBLISS O.L.
- CHAMBLISS O.L.
- CHEN J.F.
- CHEN J.F.
- DANIN-POLEG Y.
- DECKER D.S.
- DECKER-WALTERS D.S.
- DECKER-WALTERS D.S.
- Dilson Antônio Bisognin
- DUTT B.
- HEISER C.B.
- HEISER C.B.
- JEFFREY D.
- KHO Y.O
- KIHARA H.
- KIRKBRIDE J.H. Jr.
- KIRKPATRICK K.J.
- KIRKPATRICK K.J.
- KROON G.H.
- LOWER R.L.
- LOY J.B.
- MALLICK M.F.R.
- METCALF R.L.
- MOHR H.C.
- NEE M.
- NESMITH D.S.
- NEWSTROM L.E.
- NITSCH J.P.
- PARIS H.S.
- PERL-TREVES R.
- PERL-TREVES R.
- RAMACHANDRAN C.
- RHODES A.M.
- ROBINSON R.W.
- ROBINSON R.W.
- ROBINSON R.W.
- SHIFRISS O.
- SHOEMAKER W.H.
- SINGH A.K.
- SINGH A.K.
- SINGH A.K.
- SMITH B.D.
- SWIADER J.M.
- WARE G.W.
- WHITAKER T.W.
- WHITAKER T.W.
- WHITAKER T.W.
- WHITAKER T.W.
- WILSON H.D.
- Publication venue
- 'FapUNIFESP (SciELO)'
- Publication date
- Field of study
Lawson Criterion for Ignition Exceeded in an Inertial Fusion Experiment
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- Publication venue
- Publication date
- 01/01/2022
- Field of study
Lawson criterion for ignition exceeded in an inertial fusion experiment
- Author
- Abu-Shawareb H
- Acree R
- Adams J
- Adams P
- Addis B
- Aden R
- Adrian P
- Afeyan BB
- Aggleton M
- Aghaian L
- Aguirre A
- Aikens D
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- Albrecht M
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- Albritton J
- Alcala J
- Alday C
- Alessi DA
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- Alfonso N
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- Ali ZA
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- Amick P
- Ammula S
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- Ampleford DJ
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- Araya E
- Arend M
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- Asay J
- Atherton LJ
- Atkinson D
- Atkinson R
- Auerbach JM
- Austin B
- Auyang L
- Awwal AS
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- Bachmann B
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- Baxamusa SH
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- Sorem M
- Soures JM
- Spaeth ML
- Spears BK
- Spears J
- Speas S
- Speck D
- Speck R
- Spinka T
- Springer PT
- Stadermann M
- Stahl B
- Stahoviak J
- Stanton LG
- Steele R
- Steele W
- Steinman D
- Stemke R
- Stephens R
- Sterbenz S
- Sterne P
- Stevens D
- Stevers J
- Still CB
- Stoeckl C
- Stoeffl W
- Stolken JS
- Stolz C
- Stone G
- Storm E
- Stoupin S
- Stout E
- Stowers I
- Strauser R
- Streckart H
- Streit J
- Strozzi DJ
- Suratwala T
- Sutcliffe G
- Suter LJ
- Sutton SB
- Svidzinski V
- Swadling G
- Sweet W
- Szoke A
- Tabak M
- Takagi M
- Tambazidis A
- Tang V
- Taranowski M
- Taylor LA
- Telford S
- Theobald W
- Thi M
- Thomas A
- Thomas CA
- Thomas I
- Thomas R
- Thompson IJ
- Thongstisubskul A
- Thorsness CB
- Tietbohl G
- Tipton RE
- Tobin M
- Tomlin N
- Tommasini R
- Toreja AJ
- Torres J
- Town RPJ
- Townsend S
- Trenholme J
- Trivelpiece A
- Trosseille C
- Truax H
- Trummer D
- Trummer S
- Truong T
- Tubbs D
- Tubman ER
- Tunnell T
- Turnbull D
- Turner RE
- Ulitsky M
- Upadhye R
- Vaher JL
- Van Wonterghem BM
- VanArsdall P
- VanBlarcom D
- Vandenboomgaerde M
- VanQuinlan R
- Varnum WS
- Velikovich AL
- Vella A
- Verdon CP
- Vermillion B
- Vernon S
- Vesey R
- Vickers J
- Vignes RM
- Visosky M
- Vocke J
- Volegov PL
- Von Rotz R
- Vonhof S
- Vu HX
- Vu M
- Wall D
- Wall J
- Wallace R
- Wallin B
- Walmer D
- Walsh CA
- Walters CF
- Waltz C
- Wan A
- Wang A
- Wang Y
- Wark JS
- Warner BE
- Watson J
- Watt RG
- Watts P
- Weaver J
- Weaver RP
- Weaver S
- Weber CR
- Weber P
- Weber SV
- Wegner P
- Weiss K
- Welday B
- Welser-Sherrill L
- Wheeler GF
- Whistler W
- White RK
- Whitley HD
- Whitman P
- Wickett ME
- Widmann K
- Widmayer C
- Wiedwald J
- Wilcox R
- Wilcox S
- Wild C
- Wilde BH
- Wilde CH
- Wilhelmsen K
- Wilke MD
- Wilkens H
- Wilkins P
- Wilks SC
- Williams EA
- Williams GJ
- Williams W
- Williams WH
- Wilson B
- Wilson DC
- Wilson E
- Wilson R
- Winters S
- Wisoff J
- Wittman M
- Wolfe J
- Wong A
- Wong KW
- Wong L
- Wong N
- Wood R
- Woodhouse D
- Woodruff J
- Woods DT
- Woods S
- Woodworth BN
- Wooten E
- Wootton A
- Work K
- Workman JB
- Wright J
- Wu M
- Wuest C
- Wysocki FJ
- Xu H
- Yamaguchi M
- Yang B
- Yang ST
- Yatabe J
- Yeamans CB
- Yee BC
- Yi SA
- Yin L
- Young B
- Young CS
- Young CV
- Young P
- Youngblood K
- Zacharias R
- Zagaris G
- Zaitseva N
- Zaka F
- Ze F
- Zeiger B
- Zika M
- Zimmerman GB
- Zobrist T
- Zuegel JD
- Zylstra AB
- Publication venue
- 'American Physical Society (APS)'
- Publication date
- 06/07/2022
- Field of study
For more than half a century, researchers around the world have been engaged in attempts to achieve fusion ignition as a proof of principle of various fusion concepts. Following the Lawson criterion, an ignited plasma is one where the fusion heating power is high enough to overcome all the physical processes that cool the fusion plasma, creating a positive thermodynamic feedback loop with rapidly increasing temperature. In inertially confined fusion, ignition is a state where the fusion plasma can begin "burn propagation" into surrounding cold fuel, enabling the possibility of high energy gain. While "scientific breakeven" (i.e., unity target gain) has not yet been achieved (here target gain is 0.72, 1.37 MJ of fusion for 1.92 MJ of laser energy), this Letter reports the first controlled fusion experiment, using laser indirect drive, on the National Ignition Facility to produce capsule gain (here 5.8) and reach ignition by nine different formulations of the Lawson criterion
Resistance and tolerance to herbivory changes with inbreeding and ontogeny in a wild gourd (Cucurbitaceae)
- Publication venue
- 'Botanical Society of America'
- Publication date
- Field of study
Antimicrobial nectar inhibits a florally transmitted pathogen of a wild Cucurbita pepo
- Publication venue
- 'Botanical Society of America'
- Publication date
- Field of study
Cultivar-To-Wild Population Introgression in Cucurbita pepo
- Author
- Publication venue
- 'The Haworth Press'
- Publication date
- Field of study
Risk assessment of genetically engineered crops: fitness effects of virus-resistance transgenes in wild Cucurbita pepo
- Author
- Publication venue
- 'Wiley'
- Publication date
- Field of study
Chloroplast DNA diversity among wild and cultivated members of Cucurbita (Cucurbitaceae)
- Author
- AK Singh
- AP Feinberg
- DL Swofford
- DP Hurd
- DS Decker
- DS Decker
- DS Decker-Walters
- DS Decker-Walters
- F Weiling
- HD Wilson
- HD Wilson
- Hugh D. Wilson
- J Felsenstein
- John Doebley
- JT Puchalski
- KJ Sytsma
- LC Merrick
- LC Merrick
- LH Bailey
- M Nee
- MA Saghai-Maroof
- Melvin Duvall
- NF Weeden
- RK Jansen
- T Maniatis
- TC Andres
- TW Whitaker
- TW Whitaker
- TW Whittaker
- WP Bemis
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
Ratcheting up Rigor in Wildlife Management Decision Making
- Author
- Publication venue
- 'Wiley'
- Publication date
- Field of study
- …