Assessing the Consequences of Brood Parasitism and Nest Predation On Seasonal Fecundity in Passerine Birds

Brood parasites and nest predators reduce the seasonal fecundity and, hence, the population growth rates of their victims. However, most field studies do not measure directly how parasites and predators decrease seasonal fecundity, but instead measure the impact of these organisms on individual nesting attempts. Because a female may renest after losing a nest to predation, abandoning a parasitized nest, or successfully fledging a brood, knowing how brood parasites and nest predators reduce the number of offspring fledged from individual nesting attempts is not equivalent to knowing their impact on seasonal fecundity. We address this problem by developing a mathematical model that: estimates several parameters describing the natural history of this system, including the brood-parasitism rate, nest-predation rate, and probability of nest abandonment in response to a parasitism event; and extrapolates to seasonal fecundity from these parameters and others describing the length of the breeding season, the timing of events in the nesting cycle, and the productivity of parasitized and unparasitized nests. We also show how different researchers using different observational methodologies to study exactly the same population likely would arrive at noticeably different conclusions regarding the intensity of brood parasitism, and we provide mathematical formulas for comparing among several of these measures of parasitism. Our procedures extend Mayfield's method for calculating nest-success rates from nest-history data in that we simultaneously estimate parameters describing nest predation and brood parasitism, predict seasonal fecundity from these parameters, and provide confidence intervals on all parameter estimates. The model should make the design and interpretation of logistically difficult empirical studies more efficient. It also can be specialized to species affected by nest predators but not brood parasites. We use the model to analyze prairie Warbler (Dendroica discolor) and Black-capped Vireo (Vireo atricapillus) nesting data. We estimate the model's parameters for these species and use the resulting estimates to predict seasonal fecundity. For both species, the predicted seasonal fecundity closely matches the value measured directly.Integrative Biolog

Analysis of aircraft spectrometer data with logarithmic residuals

Spectra from airborne systems must be analyzed in terms of their mineral-related absorption features. Methods for removing backgrounds and extracting these features one at a time from reflectance spectra are discussed. Methods for converting radiance spectra into a form similar to reflectance spectra so that the feature extraction procedures can be implemented on aircraft spectrometer data are also discussed

A fresh perspective on canonical extensions for bounded lattices

This paper presents a novel treatment of the canonical extension of a bounded lattice, in the spirit of thetheory of natural dualities. At the level of objects, this can be achieved by exploiting the topological representation due to M. Ploscica, and the canonical extension can be obtained in the same manner as can be done in the distributive case by exploiting Priestley duality. To encompass both objects and morphismsthe Ploscica representation is replaced by a duality due to Allwein and Hartonas, recast in the style of Ploscica's paper. This leads to a construction of canonical extension valid for all bounded lattices,which is shown to be functorial, with the property that the canonical extension functor decomposes asthe composite of two functors, each of which acts on morphisms by composition, in the manner of hom-functors

Planned Behavior Typologies of Agricultural Education Teacher Educators Regarding Service Learning as a Method of Instruction: A National Mixed Methods Study

This study sought to understand the service-learning beliefs and intentions of agricultural education teacher educators. We collected quantitative data through a web-based survey instrument and course syllabi. Variables yielding statistically significant relationships were analyzed using cluster analysis, which produced three unique clusters operationalized as typologies representing the planned behaviors of teacher educators regarding service learning. For example, the Optimistically Unaware expressed positive beliefs about the method, but did not understand how to integrate service learning in their teaching methods courses. Meanwhile, the Policy-Focused Decision Makers used established education policy as anchors when navigating decisions, such as whether to feature service learning in their courses. Service-Learning Implementers espoused strong beliefs about the method’s potential while also emphasizing how it could be used to enrich the preparation of agriculture teachers. Results point to the potential service learning holds if integrated as a complement to teacher preparation rather than an addition to current practice

Clonal Interference, Multiple Mutations, and Adaptation in Large Asexual Populations

Two important problems affect the ability of asexual populations to accumulate beneficial mutations, and hence to adapt. First, clonal interference causes some beneficial mutations to be outcompeted by more-fit mutations which occur in the same genetic background. Second, multiple mutations occur in some individuals, so even mutations of large effect can be outcompeted unless they occur in a good genetic background which contains other beneficial mutations. In this paper, we use a Monte Carlo simulation to study how these two factors influence the adaptation of asexual populations. We find that the results depend qualitatively on the shape of the distribution of the effects of possible beneficial mutations. When this distribution falls off slower than exponentially, clonal interference alone reasonably describes which mutations dominate the adaptation, although it gives a misleading picture of the evolutionary dynamics. When the distribution falls off faster than exponentially, an analysis based on multiple mutations is more appropriate. Using our simulations, we are able to explore the limits of validity of both of these approaches, and we explore the complex dynamics in the regimes where neither are fully applicable.Comment: 24 pages, 5 figure

Mitochondrial heat shock protein 70, a molecular chaperone for proteins encoded by mitochondrial DNA

Mitochondrial heat shock protein 70 (mt-Hsp70) has been shown to play an important role in facilitating import into, as well as folding and assembly of nuclear-encoded proteins in the mitochondrial matrix. Here, we describe a role for mt-Hsp70 in chaperoning proteins encoded by mitochondrial DNA and synthesized within mitochondria. The availability of mt-Hsp70 function influences the pattern of proteins synthesized in mitochondria of yeast both in vivo and in vitro. In particular, we show that mt-Hsp70 acts in maintaining the var1 protein, the only mitochondrially encoded subunit of mitochondrial ribosomes, in an assembly competent state, especially under heat stress conditions. Furthermore, mt-Hsp70 helps to facilitate assembly of mitochondrially encoded subunits of the ATP synthase complex. By interacting with the ATP-ase 9 oligomer, mt-Hsp70 promotes assembly of ATP-ase 6, and thereby protects the latter protein from proteolytic degradation. Thus mt-Hsp70 by acting as a chaperone for proteins encoded by the mitochondrial DNA, has a critical role in the assembly of supra- molecular complexes

Can we evaluate population screening strategies in UK general practice? A pilot randomised controlled trial comparing postal and opportunistic screening for genital chlamydial infection

STUDY OBJECTIVE: To assess whether opportunistic and postal screening strategies for Chlamydia trachomatis can be compared with usual care in a randomised trial in general practice DESIGN: Feasibility study for a randomised controlled trial. SETTING: Three West of Scotland general medical practices: one rural, one urban/deprived and one urban/affluent. PARTICIPANTS: 600 women aged 16-30 years, 200 from each of three participating practices selected at random from a sample of West of Scotland practices that had expressed interest in the study. The women could opt out of the study. Those who did not were randomly assigned to one of three groups: postal screening, opportunistic screening or usual care. MAIN RESULTS: 38% (85/221) of the approached practices expressed interest in the study. Data were collected successfully from the 3 participating practices, although intensive support was required. There were considerable workload implications for staff, both in relation to implementing the screening strategies and managing the research process. 124 of the 600 women opted out of the study. During the four-month study period, 55% (81/146) of the control group attended their practice but none was offered screening. 59% (80/136) women in the opportunistic group attended their practice of whom 55% (44/80) were offered screening. Of those, 64% (28/44) accepted, representing 21% of the opportunistic group. 48% (59/124) of the postal group returned samples. CONCLUSION: A randomised controlled trial comparing postal and opportunistic screening for chlamydial infection in general practice is feasible, though resource intensive. There may be problems with generalising from screening trials in which patients may opt out from the offer of screening