Application of qualitative risk assessment to prioritize hazards in pork products in Brazil

The main objective of carcass and meat inspection is to promote animal and public health by controlling and detecting pathogens. Procedures of inspection of pig carcasses in Brazil are based on macroscopic examinations (incisions and palpations) attempting to identify potential hazards to animal and human health, mainly related to classic zoonotic diseases. This inspection structure is based on evidence related to the high relevance of parasites in which transmission and maintenance are strictly linked to the low level of biosecurity measures applied in the farms

Qualidade microbiológica de queijos coloniais comercializados em Porto Alegre-RS

Colonial cheese is a traditional dairy product in southern Brazil and is commonly purchased by the citizens of Porto Alegre. However, there is still a lack of technical regulation of colonial cheese, and there is little information about the microbiological quality of this product at the retail level. Thus, the objectives of this study were to (i) evaluate compliance with the legal microbiological standards of colonial cheese sampled from street fairs and the central market of the city of Porto Alegre; (ii) statistically test the hypothesis of an association between noncompliance with the standards and local purchasing (street fairs or central market); (iii) estimate the number of Listeria spp. and Listeria monocytogenes in the positive samples; and (iv) characterize the L. monocytogenes strains by serotyping and macrorestriction (PFGE). For this purpose, 205 cheese samples belonging to 17 different brands were analyzed. The microbiological analyses were conducted according to ISO standardized protocols for the detection of L. monocytogenes and Salmonella spp. or by enumeration of coagulase-positive Staphylococcus and coliforms at 45°C. Among the samples, 47.31% did not comply with at least one of the microbiological standards established by the Brazilian legislation and were thus unsuitable for human consumption. Regarding the coliforms at 45ºC and coagulase-positive Staphylococcus, 10.73% and 40.48% of the samples presented higher counts than the legal parameter, respectively. There was no association between the frequency of samples with coagulase-positive Staphylococcus counts above the legal parameter and local of purchasing; however, the commercial brand influenced the frequency of unsuitable samples This may indicate failures of hygiene during cheese production. Salmonella spp. were not detected. Listeria monocytogenes was isolated from 2.9% of the samples. The estimated average populations of Listeria spp. and L. monocytogenes were low in the positive cheese samples at -3.3 log CFU g‾1 and -2.26 log CFU g‾¹, respectively. The strains of L. monocytogenes belonged to serovars 1/2a, 1/2b and 1/2c and could be grouped into five pulsotypes with no evident epidemiological relation among them. The results demonstrate the need to improve the hygiene procedures during colonial cheese production and to strengthen monitoring at the dairy plants and retail levels.O queijo colonial é um derivado lácteo típico do sul do Brasil, e amplamente adquirido pela população da cidade de Porto Alegre. Porém, esse produto lácteo ainda não conta com regulamento técnico específico e ainda há poucos dados sobre a qualidade microbiológica dos queijos ofertados à população. Sendo assim, os objetivos do estudo foram: (i) avaliar os parâmetros microbiológicos previstos na legislação em queijos coloniais comercializados em Feiras Modelo e Mercado Público de Porto Alegre; (ii) testar hipóteses estatísticas de associação entre violação do padrão microbiológico estabelecido na legislação com o ponto de comercialização; (iii) estimar a distribuição de contagem de Listeria sp. e L. monocytogenes nos queijos em que esta bactéria foi detectada e (iv) caracterizar as cepas de L. monocytogenes por sorotipificação e macro-restrição. Para tanto, foram analisadas 205 amostras de queijo, compreendendo 17 marcas distintas. As análises microbiológicas foram conduzidas conforme protocolos padronizados de análise de alimentos e evidenciaram que 47,31% dos queijos estavam não conformes com pelo menos um dos parâmetros microbiológicos estabelecidos na RDC nº12/2001, portanto impróprios ao consumo humano. Com relação à quantificação de coliformes a 45ºC e Staphylococcus coagulase positiva, respectivamente, 10,73% e 40,48% das amostras apresentaram contagens superiores ao estabelecido na legislação A distribuição das amostras não conformes com o parâmetro Staphylococcus coagulase positiva não esteve associada ao ponto de comercialização, mas foi influenciada pela marca comercial do queijo, indicando possíveis falhas na elaboração dos mesmos. Não houve detecção de Salmonella sp. e em 2,9% das amostras havia presença de L. monocytogenes. A população média estimada nos queijos positivos para Listeria sp. e L. monocytogenes foi baixa, respectivamente, -3,3 log UFC g-1 e -2,26 log UFC g-1. As cepas de L. monocytogenes pertenciam aos sorovares 1/2a, 1/2b e 1/2c e a macro-restrição demonstrou a presença de cinco pulsotipos sem relação epidemiológica evidente. Os resultados demonstram a necessidade de melhorar a qualidade higiênica da elaboração do queijo colonial e aumentar a fiscalização sanitária desse produto

Characterization of the transfer probability of Salmonella ser. Typhimurium between pork and a cutting knife in an experimental model

Cross-contamination is an important event for bacterial transfer throughout the pork production chain. In Brazil, Salmonella sp. is the most relevant hazard in the pork industry, and further knowledge concerning its contamination is essential for in-depth risk assessments. Thus, we aimed to assess the transfer probability of Salmonella sp. between a knife and pork in a domestic kitchen scenario to provide parametrization for incorporating transfer of Salmonella sp. in risk assessment models. To estimate Salmonella Typhimuium transfer rates between contaminated pork and a knife blade during cutting, 23 independent experiments were performed. A Bayesian inference was utilized to determine the transfer probability, capturing the uncertainty generated in the transfer probability experiments. The mean transfer probability was 0.03 for knife to pork [0.029; 0.032] 95% credible interval (CrI) and 0.0042 for pork to knife [0.0041; 0.0043] 95% CrI. The probabilistic estimate of the transfer probability of Salmonella sp. during pork cutting gives insights on a relevant parameter for the consumer phase of the pork production industry in Brazil, allowing for enhanced risk assessment models

Análise epidemiológica de carcaças bovinas afetadas por cisticercose e hidatidose no estado do Rio Grande do Sul de 2014 a 2018

Bovine cysticercosis and hydatidosis are frequently identified by inspectors in slaughterhouses from the state of Rio Grande do Sul. Slaughterhouse records can provide valuable information for animal-related diseases and public health surveillance. Analyzing these data can aid set priorities to regions or properties that need more attention. Slaughter condemnation data is collected daily and stored in the Agricultural Defense System (SDA) database of the State Veterinary Services. However, it needs to be turned into useful information in bovine cysticercosis and hydatidosis surveillance programs. This study aimed to discuss how the analysis of condemnation data in the context of epidemiology can be useful for a surveillance system of bovine cysticercosis and hydatidosis. For this purpose, slaughter data of 5,137,870 cattle from 480,000 animal movement permits (GTA) from 97,891 farms from 2014 to 2018 were obtained from the Secretary of Agriculture, Livestock and Rural Development of the State of Rio Grande do Sul (SEAPDR-RS). Differences in the occurrence rates of bovine cysticercosis and hydatidosis among mesoregions over time were assessed through generalized linear models. Cysticercosis was identified in 65,379 (1.27%) carcasses and hydatidosis in 323,395 (6.29%). The occurrence rates of both diseases varied distinctly over time between the regions (p<0.01). Next, a process was developed to identify priority farms to target a surveillance program based on the prevalence. Period prevalence for cysticercosis and hydatidosis was obtained for each farm. The epidemiological indicator was calculated for each farm, dividing the number of affected carcasses by the number of bovines sent to slaughter during the period. The mean prevalence was obtained, and the exact binomial test was applied to identify farms presenting prevalence above the mean. It was observed that 2.48% and 6.17% of the farms had prevalence above the population mean prevalence of cysticercosis and hydatidosis, respectively. The Western mesoregion had the highest percentage of farms with prevalence above the average for cysticercosis (6.9%), followed by the Southwest mesoregion (6.0%). For hydatidosis, the percentage frequency of farms with prevalence above the average was markedly higher in the mesoregions Southeast (32.8%) and Southwest (29.5%). The results showed that analysis of slaughterhouse condemnation data of SDA is useful to identify situations in which the occurrence of the diseases is significantly higher than the average to apply additional measures or epidemiological investigations. This information may be useful in plans of epidemiological surveillance programs for controlling bovine cysticercosis and hydatidosis by the State’s Official Veterinary Services.Lesões características de cisticercose e hidatidose bovina são frequentemente identificadas por fiscais em abatedouros no Rio Grande do Sul. Dados de condenações destas propriedades são coletados diariamente e armazenados em banco de dados do Sistema de Defesa Agropecuária (SDA) da Secretaria Estadual de Agricultura, Pecuária e Desenvolvimento Rural (SEAPDR-RS), podendo fornecer informações valiosas para a vigilância de doenças de importância para a saúde animal e saúde pública, bem como, contribuir para a tomada de decisão direcionada a propriedades rurais ou regiões que realmente necessitam de intervenção sanitária. No entanto, estes dados precisam ser transformados em informação útil para programas de prevenção e controle da cisticercose e da hidatidose bovina. O presente trabalho teve como objetivo analisar os dados de condenações de carcaças bovinas abatidas em frigoríficos sob inspeção estadual no Rio Grande do Sul, no período de 2014 a 2018. Foram utilizados dados de 5.137.870 bovinos enviados para abate em 480.000 lotes (GTA emitidas) de 97.891 fazendas. Diferenças nas taxas de ocorrência de cisticercose e hidatidose bovina ao longo do tempo, entre as mesorregiões do Rio Grande do Sul, foram analisadas por meio de modelos lineares generalizados. A cisticercose foi identificada em 65.379 (1,27%) carcaças e a hidatidose em 323.395 (6,29%) carcaças. Ao longo do tempo detectou-se uma tendência de redução nas taxas de ocorrência das duas doenças que, por sua vez, se comportaram de maneira distinta entre as mesorregiões (p<0,01). Por outro lado, desenvolveu-se um processo para identificação de propriedades prioritárias para ação de vigilância com base na prevalência. A prevalência no período para cisticercose e hidatidose foi calculada para cada propriedade. O indicador foi obtido dividindo-se o número de carcaças afetadas pelo número total de animais enviados para abate, ou seja, é a proporção de ocorrência das parasitoses dentre os animais enviados para abate em cada propriedade no período de cinco anos. A prevalência média ou populacional (π), que é a média das prevalências de todas as propriedades, foi calculada e, em seguida, foi aplicado o teste exato binomial para identificar as propriedades com prevalência acima da média para ambas as doenças. Foi observado que 2,48% (2.425/97.841) e 6,17% (6.039/97.841) das propriedades apresentavam prevalências acima da média populacional para cisticercose e hidatidose, respectivamente. Observou-se que a mesorregião Centro Ocidental possui maior frequência percentual de propriedades com prevalência de cisticercose acima da média (6,9%), seguido pela mesorregião Sudoeste (6,0%). Já para hidatidose, a frequência percentual de propriedades com prevalência acima da média foi substancialmente superior nas mesorregiões Sudeste (32,8%) e Sudoeste (29,5%) quando comparada às demais. Os resultados demonstraram que com os dados de condenações de abatedouro do SDA foi possível identificar situações em que a ocorrência das doenças é significativamente alta e que necessitam de medidas ou investigações epidemiológicas adicionais. O conhecimento dessa informação pode ser útil no planejamento de programas de vigilância epidemiológica para o controle da cisticercose e hidatidose bovina pelos serviços veterinários oficiais do Estado

Analysis of the performance of the animal health surveillance system in the outbreak of swine vesicular disease in the state of Santa Catarina - Brazil

Background: The occurrence of vesicular disease associated with Senecavirus A in a pig-producing region of Santa Catarina increased in 2015, reflected by the number of syndromic notifications to the official animal health service. In view of the recurrence of this event in 2018, the objectives of this study were to analyze the official data related to cases of suspected vesicular disease in pigs and to evaluate whether the experience in conducting the investigations of 2015 was incorporated into the years subsequent to 2015. We addressed this goal by analysis of the performance parameters of the state animal health surveillance system. Materials, Methods & Results: Descriptive analyses of data from official investigations of suspected vesicular disease in swine in different regions were carried out, and statistical models were used to: i) test the effect of the year on the age of the investigated injuries; ii) assess whether there was an association between the year and the type of outcome of the official investigation (discarded case or a probable case of vesicular disease, which resulted in the collection of samples for laboratory diagnosis and interdiction of the affected properties); iii) evaluate whether there was an association between the year and the detection of Senecavirus A RNA among the molecular analyses carried out after a case was classified as probable vesicular disease. From 05/22/2015 to 03/28/2019, there were 2093 notifications of suspected vesicular disease in pigs to the official service of Santa Catarina, with 1538 (73.5%) occurring in 2015 and 555 (26.5%) in subsequent years. After 2015, when compared to the base year, the chances of detecting late vesicular lesions (>3 days) were similar (increased 1.11 times, but there was no statistically significant association), in view of a panorama in which 55.29% of cases had the lesions classified as late throughout the analyzed period. The variation in the odds was relatively homogeneous among the regional units (Intraclass Correlation Coefficient [ICC] = 10.9%), but in the São Miguel do Oeste unit, it was significantly lower than the average. It was also lower than the average, in regional units with a high ratio of properties with pigs attended by the official veterinarian. The chances of cases being considered probable increased 32.3 times, but the descriptive analysis of the average interdiction period decreased. The estimated ICC was 34.9%, and in Campos Novos and Caçador, the chances of cases being probable were significantly higher than the average, while in the Canoinhas unit, the chances were significantly lower. The prevalence of cases with molecular detection of Senecavirus A was 78% lower after 2015. Discussion: Despite the increased sensitivity of the surveillance process for suspected vesicular events in the years after 2015, the specificity of the molecular diagnosis of Senecavirus A decreased. This is likely, because there was difficulty in sampling lesions with vesicular fluid and/or when the lesion epithelium had recently been disrupted, conditions most conducive to the identification of viral genetic material. In this context, the western region of the state, the main pig producer, continued to be the most accurate in confirming cases of Senecavirus A. Even with the improvements of laboratory diagnosis and the reduction of the interdiction period, it was important to standardize the differentiation of a late infectious lesion from a traumatic injury, as well as any association with other sample analyses, in order to minimize the disorders linked to the mischaracterization of a manifestation of Senecavirus A, without compromising the syndromic focus of its vesicular character