Additional file 1 of sciReptor: analysis of single-cell level immunoglobulin repertoires

Database structure and quality control. Visual representation of the relational database used by sciReptor. Quality control output showing the read length distribution, the statistics for sequence tag identification and the reads per cell statistics. (PDF 369 kb

AIRR Standards

<p>This is the V1 release of the Standard for the Minimum information about an Adaptive Immune Receptor Repertoire Sequencing Experiment (MiAIRR V1).</p> <p>Description of MiAIRR V1 can be found in this article:</p> <ul> <li>Rubelt, F. <em>et al</em>. Adaptive Immune Receptor Repertoire Community recommendations for sharing immune-repertoire sequencing data. Nat Immunol 18:1274-1278 (2017) <a href="https://www.ncbi.nlm.nih.gov/pubmed/29144493">[PMID:29144493]</a></li> </ul> <p>Description of the Adaptive Immune Receptor Repertoire (AIRR) Community can be found in this article:</p> <ul> <li>Breden, F. <em>et al</em>. Reproducibility and Reuse of Adaptive Immune Receptor Repertoire Data. Frontiers Immunol 8:1418 (2017) <a href="https://www.ncbi.nlm.nih.gov/pubmed/29163494">[PMID:29163494]</a></li> </ul> <p>The V1 release defines the primary data elements as the minimum information to be archived with an adaptive immune receptor repertoire sequencing experiment. The computational specifications, data file formats, and reference libraries are still being finalized and will be released in a later version.</p