3,377 research outputs found
KINETIC AND KINEMATIC DIFFERENCES OF TWO VOLLEYBALL-SPIKING JUMPS
The purpose of this study was to investigate the net muscle moments and work on the lower limbs in two different volleyball-spiking jumps by inverse dynamics. A Kistler force
platform (600 Hz) was synchronized with a Peak high speed camera (120Hz) to collect the volleyball jumping action. Sixteen volleyball players (8 males and 8 females) were the
subjects of the study. The results revealed that the work done in knee joints during eccentric contraction were greater than ankle and hip joints in both two volleyball jumps. In addition, the hip has a greater work contribution on both hop and step-close jump
Prioritizing disease candidate genes by a gene interconnectedness-based approach
<p>Abstract</p> <p>Background</p> <p>Genome-wide disease-gene finding approaches may sometimes provide us with a long list of candidate genes. Since using pure experimental approaches to verify all candidates could be expensive, a number of network-based methods have been developed to prioritize candidates. Such tools usually have a set of parameters pre-trained using available network data. This means that re-training network-based tools may be required when existing biological networks are updated or when networks from different sources are to be tried.</p> <p>Results</p> <p>We developed a parameter-free method, interconnectedness (ICN), to rank candidate genes by assessing the closeness of them to known disease genes in a network. ICN was tested using 1,993 known disease-gene associations and achieved a success rate of ~44% using a protein-protein interaction network under a test scenario of simulated linkage analysis. This performance is comparable with those of other well-known methods and ICN outperforms other methods when a candidate disease gene is not directly linked to known disease genes in a network. Interestingly, we show that a combined scoring strategy could enable ICN to achieve an even better performance (~50%) than other methods used alone.</p> <p>Conclusions</p> <p>ICN, a user-friendly method, can well complement other network-based methods in the context of prioritizing candidate disease genes.</p
Project RISE: Recognizing Industrial Smoke Emissions
Industrial smoke emissions pose a significant concern to human health. Prior
works have shown that using Computer Vision (CV) techniques to identify smoke
as visual evidence can influence the attitude of regulators and empower
citizens to pursue environmental justice. However, existing datasets are not of
sufficient quality nor quantity to train the robust CV models needed to support
air quality advocacy. We introduce RISE, the first large-scale video dataset
for Recognizing Industrial Smoke Emissions. We adopted a citizen science
approach to collaborate with local community members to annotate whether a
video clip has smoke emissions. Our dataset contains 12,567 clips from 19
distinct views from cameras that monitored three industrial facilities. These
daytime clips span 30 days over two years, including all four seasons. We ran
experiments using deep neural networks to establish a strong performance
baseline and reveal smoke recognition challenges. Our survey study discussed
community feedback, and our data analysis displayed opportunities for
integrating citizen scientists and crowd workers into the application of
Artificial Intelligence for social good.Comment: Technical repor
MetaSquare: An integrated metadatabase of 16S rRNA gene amplicon for microbiome taxonomic classification
MOTIVATION: Taxonomic classification of 16S ribosomal RNA gene amplicon is an efficient and economic approach in microbiome analysis. 16S rRNA sequence databases like SILVA, RDP, EzBioCloud and HOMD used in downstream bioinformatic pipelines have limitations on either the sequence redundancy or the delay on new sequence recruitment. To improve the 16S rRNA gene-based taxonomic classification, we merged these widely used databases and a collection of novel sequences systemically into an integrated resource.
RESULTS: MetaSquare version 1.0 is an integrated 16S rRNA sequence database. It is composed of more than 6 million sequences and improves taxonomic classification resolution on both long-read and short-read methods.
AVAILABILITY AND IMPLEMENTATION: Accessible at https://hub.docker.com/r/lsbnb/metasquare_db and https://github.com/lsbnb/MetaSquare.
SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online
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