485 research outputs found

    The microbiota continuum along the female reproductive tract and its relation to uterine-related diseases

    Get PDF
    Reports on bacteria detected in maternal fluids during pregnancy are typically associated with adverse consequences, and whether the female reproductive tract harbours distinct microbial communities beyond the vagina has been a matter of debate. Here we systematically sample the microbiota within the female reproductive tract in 110 women of reproductive age, and examine the nature of colonisation by 16S rRNA gene amplicon sequencing and cultivation. We find distinct microbial communities in cervical canal, uterus, fallopian tubes and peritoneal fluid, differing from that of the vagina. The results reflect a microbiota continuum along the female reproductive tract, indicative of a non-sterile environment. We also identify microbial taxa and potential functions that correlate with the menstrual cycle or are over-represented in subjects with adenomyosis or infertility due to endometriosis. The study provides insight into the nature of the vagino-uterine microbiome, and suggests that surveying the vaginal or cervical microbiota might be useful for detection of common diseases in the upper reproductive tract.Shenzhen Municipal Government of China [JCYJ20160229172757249, JCYJ20150601090833370]; Danish Strategic Research Council [2106-07-0021]; Ole Romer grant from Danish Natural Science Research Council; Solexa project [272-07-0196]SCI(E)ARTICLE

    Cramer-Rao Bounds for Near-Field Sensing: A Generic Modular Architecture

    Full text link
    A generic modular array architecture is proposed, featuring uniform/non-uniform subarray layouts that allows for flexible deployment. The bistatic near-field sensing system is considered, where the target is located in the near-field of the whole modular array and the far-field of each subarray. Then, the closed-form expressions of Cramer-Rao bounds (CRBs) for range and angle estimations are derived based on the hybrid spherical and planar wave model (HSPM). Simulation results validate the accuracy of the derived closed-form CRBs and demonstrate that: i) The HSPM with varying angles of arrival (AoAs) between subarrays can reduce the CRB for range estimation compared to the traditional HSPM with shared AoA; and ii) The proposed generic modular architecture with subarrays positioned closer to the edges can significantly reduce the CRBs compared to the traditional modular architecture with uniform subarray layout, when the array aperture is fixed

    Enhancing Representation Learning for Periodic Time Series with Floss: A Frequency Domain Regularization Approach

    Full text link
    Time series analysis is a fundamental task in various application domains, and deep learning approaches have demonstrated remarkable performance in this area. However, many real-world time series data exhibit significant periodic or quasi-periodic dynamics that are often not adequately captured by existing deep learning-based solutions. This results in an incomplete representation of the underlying dynamic behaviors of interest. To address this gap, we propose an unsupervised method called Floss that automatically regularizes learned representations in the frequency domain. The Floss method first automatically detects major periodicities from the time series. It then employs periodic shift and spectral density similarity measures to learn meaningful representations with periodic consistency. In addition, Floss can be easily incorporated into both supervised, semi-supervised, and unsupervised learning frameworks. We conduct extensive experiments on common time series classification, forecasting, and anomaly detection tasks to demonstrate the effectiveness of Floss. We incorporate Floss into several representative deep learning solutions to justify our design choices and demonstrate that it is capable of automatically discovering periodic dynamics and improving state-of-the-art deep learning models.Comment: 12 page

    MDCR: A Dataset for Multi-Document Conditional Reasoning

    Full text link
    The same real-life questions posed to different individuals may lead to different answers based on their unique situations. For instance, whether a student is eligible for a scholarship depends on eligibility conditions, such as major or degree required. ConditionalQA was proposed to evaluate models' capability of reading a document and answering eligibility questions, considering unmentioned conditions. However, it is limited to questions on single documents, neglecting harder cases that may require cross-document reasoning and optimization, for example, "What is the maximum number of scholarships attainable?" Such questions over multiple documents are not only more challenging due to more context having to understand, but also because the model has to (1) explore all possible combinations of unmentioned conditions and (2) understand the relationship between conditions across documents, to reason about the optimal outcome. To evaluate models' capability of answering such questions, we propose a new dataset MDCR, which can reflect real-world challenges and serve as a new test bed for complex conditional reasoning that requires optimization. We evaluate this dataset using the most recent LLMs and demonstrate their limitations in solving this task. We believe this dataset will facilitate future research in answering optimization questions with unknown conditions

    Immunogenicity and Protective Efficacy against Murine Tuberculosis of a Prime-Boost Regimen with BCG and a DNA Vaccine Expressing ESAT-6 and Ag85A Fusion Protein

    Get PDF
    Heterologous prime-boost regimens utilizing BCG as a prime vaccine probably represent the best hope for the development of novel tuberculosis (TB) vaccines. In this study, we examined the immunogenicity and protective efficacy of DNA vaccine (pcD685A) expressing the fusion protein of Ag85A and ESAT-6 (r685A) and its booster effects in BCG-immunized mice. The recombinant r685A fusion protein stimulated higher level of antigen-specific IFN-γ release in tuberculin skin test- (TST-) positive healthy household contacts of active pulmonary TB patients than that in TST-negative population. Vaccination of C57BL/6 mice with pcD685A resulted in significant protection against challenge with virulent Mycobacterium tuberculosis H37Rv when compared with the control group. Most importantly, pcD685A could act as a BCG booster and amplify Th1-type cell-mediated immunity in the lung of BCG-vaccinated mice as shown the increased expression of IFN-γ. The most significant reduction in bacterial load of both spleen and lung was obtained in mice vaccinated with BCG prime and pcD685A DNA booster when compared with BCG or pcD685A alone. Thus, our study indicates that pcD685A may be an efficient booster vaccine against TB with a strong ability to enhance prior BCG immunity

    Characterization of a Ag+-Selective Electrode Based on Naphthalimide Derivative as Ionophore

    Get PDF
    A naphthalimide derivative has been explored as neutral ionophore for Ag+-selective electrode. Potentiometric response revealed that electrode based on the proposed ionophore with 2-nitrophenyl octyl ether as solvent in a poly (vinyl chloride) membrane matrix shows a measuring range of 1.0×10-6-1.0×10-2 M with a slope of 50.4±0.3 mV/decade. This electrode has high selectivity to Ag+ with respect to alkaline, alkaline earth and other heavy metal ions

    Study on Construction Resource Optimization and Uncertain Risk of Urban Sewage Pipe Network

    Get PDF
    With considering sewage pipe network upgrading projects in the “villages” in cities, the optimization of construction resources and the assessment of delay risks could be achieved. Based on the schedule-cost hypothetical theory, the mathematical model with constraint indicators was established to obtain the expression of optimal resource input, and conclude the method to analyze the schedule uncertainties. The analysis showed that cyclical footage of pipe could be regarded as a relatively fixed value, and the cost can be regarded as a function that depending on the number of working teams. The optimal number of teams and the optimal schedule occurred when the minimum total cost achieved. In the case of insufficient meteorological data, the Monte Carlo simulation method and uncertainty analysis method can be applied to assess the impact of rainfall on the total construction period, correspondingly the probability of such risk could be derived. The calculation showed that the risk of overdue completion varied significantly according to the construction starting time. It was necessary to take rainfall risk into consideration and make corresponding strategies and measures

    SPICER: Self-Supervised Learning for MRI with Automatic Coil Sensitivity Estimation and Reconstruction

    Full text link
    Deep model-based architectures (DMBAs) integrating physical measurement models and learned image regularizers are widely used in parallel magnetic resonance imaging (PMRI). Traditional DMBAs for PMRI rely on pre-estimated coil sensitivity maps (CSMs) as a component of the measurement model. However, estimation of accurate CSMs is a challenging problem when measurements are highly undersampled. Additionally, traditional training of DMBAs requires high-quality groundtruth images, limiting their use in applications where groundtruth is difficult to obtain. This paper addresses these issues by presenting SPICE as a new method that integrates self-supervised learning and automatic coil sensitivity estimation. Instead of using pre-estimated CSMs, SPICE simultaneously reconstructs accurate MR images and estimates high-quality CSMs. SPICE also enables learning from undersampled noisy measurements without any groundtruth. We validate SPICE on experimentally collected data, showing that it can achieve state-of-the-art performance in highly accelerated data acquisition settings (up to 10x)
    corecore